RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
TRIO-208ENST00000506611 CHIC1Q5VXU3 224 aa25.7■■□□□ 1.7
TRIO-208ENST00000506611 PHF23Q9BUL5 403 aaPredicted RBP22.66■■□□□ 1.22
TRIO-208ENST00000506611 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
TRIO-208ENST00000506611 FOXD1Q16676 465 aa21.11■□□□□ 0.97
TRIO-208ENST00000506611 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
TRIO-208ENST00000506611 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
TRIO-208ENST00000506611 ADRA2BP18089 450 aa20.03■□□□□ 0.8
TRIO-208ENST00000506611 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
TRIO-208ENST00000506611 MSH5O43196 834 aa19.48■□□□□ 0.71
TRIO-208ENST00000506611 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
TRIO-208ENST00000506611 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
TRIO-208ENST00000506611 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
TRIO-208ENST00000506611 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
TRIO-208ENST00000506611 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
TRIO-208ENST00000506611 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
TRIO-208ENST00000506611 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
TRIO-208ENST00000506611 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
TRIO-208ENST00000506611 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
TRIO-208ENST00000506611 KCNA4P22459 653 aa17.47■□□□□ 0.39
TRIO-208ENST00000506611 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
TRIO-208ENST00000506611 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
TRIO-208ENST00000506611 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
TRIO-208ENST00000506611 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
TRIO-208ENST00000506611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
TRIO-208ENST00000506611 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
TRIO-208ENST00000506611 SLC4A1APQ9BWU0 796 aaKnown RBP16.49■□□□□ 0.23
TRIO-208ENST00000506611 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
TRIO-208ENST00000506611 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
TRIO-208ENST00000506611 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
TRIO-208ENST00000506611 ZBTB22O15209 634 aa16.13■□□□□ 0.17
TRIO-208ENST00000506611 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
TRIO-208ENST00000506611 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
TRIO-208ENST00000506611 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
TRIO-208ENST00000506611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
TRIO-208ENST00000506611 CAPN15O75808 1086 aa15.94■□□□□ 0.14
TRIO-208ENST00000506611 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
TRIO-208ENST00000506611 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
TRIO-208ENST00000506611 DSG3P32926 999 aa15.82■□□□□ 0.12
TRIO-208ENST00000506611 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
TRIO-208ENST00000506611 APLP2Q06481 763 aa15.8■□□□□ 0.12
TRIO-208ENST00000506611 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
TRIO-208ENST00000506611 ZNF219Q9P2Y4 722 aaPredicted RBP15.73■□□□□ 0.11
TRIO-208ENST00000506611 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
TRIO-208ENST00000506611 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
TRIO-208ENST00000506611 ABCB7O75027 752 aa15.66■□□□□ 0.1
TRIO-208ENST00000506611 ATXN8OSP0DMR3 200 aa15.52■□□□□ 0.08
TRIO-208ENST00000506611 POLA2Q14181 598 aa15.49■□□□□ 0.07
TRIO-208ENST00000506611 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
TRIO-208ENST00000506611 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
TRIO-208ENST00000506611 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
TRIO-208ENST00000506611 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
TRIO-208ENST00000506611 FBLN2P98095 1184 aa14.91□□□□□ -0.02
TRIO-208ENST00000506611 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
TRIO-208ENST00000506611 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
TRIO-208ENST00000506611 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
TRIO-208ENST00000506611 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
TRIO-208ENST00000506611 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
TRIO-208ENST00000506611 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
TRIO-208ENST00000506611 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
TRIO-208ENST00000506611 CHRDL2Q6WN34 429 aa14.55□□□□□ -0.08
TRIO-208ENST00000506611 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
TRIO-208ENST00000506611 POTEHQ6S545 545 aa14.48□□□□□ -0.09
TRIO-208ENST00000506611 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
TRIO-208ENST00000506611 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
TRIO-208ENST00000506611 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
TRIO-208ENST00000506611 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
TRIO-208ENST00000506611 CLEC11AQ9Y240 323 aa14.32□□□□□ -0.12
TRIO-208ENST00000506611 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIO-208ENST00000506611 PROM2Q8N271 834 aa14.22□□□□□ -0.13
TRIO-208ENST00000506611 FKBP8Q14318 412 aa14.15□□□□□ -0.14
TRIO-208ENST00000506611 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
TRIO-208ENST00000506611 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
TRIO-208ENST00000506611 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
TRIO-208ENST00000506611 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
TRIO-208ENST00000506611 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
TRIO-208ENST00000506611 EVX2Q03828 476 aa13.9□□□□□ -0.18
TRIO-208ENST00000506611 HAX1O00165 279 aa13.88□□□□□ -0.19
TRIO-208ENST00000506611 FARP1Q9Y4F1 1045 aaPredicted RBP13.88□□□□□ -0.19
TRIO-208ENST00000506611 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
TRIO-208ENST00000506611 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
TRIO-208ENST00000506611 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
TRIO-208ENST00000506611 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
TRIO-208ENST00000506611 MIER1Q8N108 512 aa13.68□□□□□ -0.22
TRIO-208ENST00000506611 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
TRIO-208ENST00000506611 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
TRIO-208ENST00000506611 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRIO-208ENST00000506611 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
TRIO-208ENST00000506611 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
TRIO-208ENST00000506611 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
TRIO-208ENST00000506611 GABBR2O75899 941 aa13.51□□□□□ -0.25
TRIO-208ENST00000506611 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
TRIO-208ENST00000506611 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
TRIO-208ENST00000506611 NUBP1P53384 320 aa13.46□□□□□ -0.25
TRIO-208ENST00000506611 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
TRIO-208ENST00000506611 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
TRIO-208ENST00000506611 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
TRIO-208ENST00000506611 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
TRIO-208ENST00000506611 IFNLR1Q8IU57 520 aaPredicted RBP13.41□□□□□ -0.26
TRIO-208ENST00000506611 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms