RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 IER2Q9BTL4 223 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 MRS2Q9HD23 443 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 EGFL7Q9UHF1 273 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 NOL7Q9UMY1 257 aaKnown RBP6.77□□□□□ -1.33
SF1-217ENST00000486960 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
SF1-217ENST00000486960 CTDP1Q9Y5B0 961 aaPredicted RBP6.77□□□□□ -1.33
SF1-217ENST00000486960 MAP2P11137 1827 aaKnown RBP6.77□□□□□ -1.33
SF1-217ENST00000486960 ANKRD50Q9ULJ7 1429 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 G3V3G9 751 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 K7ELQ4 463 aaPredicted RBP6.76□□□□□ -1.33
SF1-217ENST00000486960 CA12O43570 354 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 HSP90AB1P08238 724 aaKnown RBP6.76□□□□□ -1.33
SF1-217ENST00000486960 FAM200BP0CF97 657 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 FANCCQ00597 558 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 TUSC1Q2TAM9 212 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 CIAPIN1Q6FI81 312 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.76□□□□□ -1.33
SF1-217ENST00000486960 LRCH3Q96II8 777 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 KLF15Q9UIH9 416 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 INPP5FQ9Y2H2 1132 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 ANKRD30AQ9BXX3 1397 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 MUC6Q6W4X9 2439 aa6.76□□□□□ -1.33
SF1-217ENST00000486960 YTHDC2Q9H6S0 1430 aaKnown RBP6.76□□□□□ -1.33
SF1-217ENST00000486960 NCOR1O75376 2440 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 CFAP54Q96N23 3096 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 H0YGN5 161 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 H3BRB1 525 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 ABL1P00519 1130 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 LMNB1P20700 586 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 ZNF76P36508 570 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 PLEKHG4Q58EX7 1191 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 MAP1SQ66K74 1059 aaPredicted RBP6.75□□□□□ -1.33
SF1-217ENST00000486960 GLYCTKQ8IVS8 523 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 ARPC5LQ9BPX5 153 aa6.75□□□□□ -1.33
SF1-217ENST00000486960 TUT1Q9H6E5 874 aaKnown RBP6.75□□□□□ -1.33
SF1-217ENST00000486960 ZFHX4Q86UP3 3567 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 NFKBIEO00221 500 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 DDNO94850 711 aaPredicted RBP6.74□□□□□ -1.33
SF1-217ENST00000486960 NOS2P35228 1153 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 MAP2K2P36507 400 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 NBPF9Q3BBW0 867 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 DALRD3Q5D0E6 543 aaKnown RBP6.74□□□□□ -1.33
SF1-217ENST00000486960 SYCP2LQ5T4T6 812 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 CC2D1AQ6P1N0 951 aaPredicted RBP6.74□□□□□ -1.33
SF1-217ENST00000486960 CCDC89Q8N998 374 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 ATL2Q8NHH9 583 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 PRO3102Q9H379 93 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 TAF1DQ9H5J8 278 aaPredicted RBP6.74□□□□□ -1.33
SF1-217ENST00000486960 OCEL1Q9H607 264 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 LZTS1Q9Y250 596 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 CACNA1SQ13698 1873 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 SYNGAP1Q96PV0 1343 aa6.74□□□□□ -1.33
SF1-217ENST00000486960 CDH23Q9H251 3354 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.73□□□□□ -1.33
SF1-217ENST00000486960 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 TBX3O15119 743 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 GCP02774 474 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 MYL1P05976 194 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 CHRNA5P30532 468 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 ECE1P42892 770 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 TRAPPC10P48553 1259 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 CST9Q5W186 159 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 CTU1Q7Z7A3 348 aaKnown RBP6.73□□□□□ -1.33
SF1-217ENST00000486960 CHPFQ8IZ52 775 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 TTC30BQ8N4P2 665 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 PHOX2BQ99453 314 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 HOMER2Q9NSB8 354 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 PIM2Q9P1W9 311 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 ABCF2Q9UG63 623 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 CACNA1BQ00975 2339 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 ADGRF5Q8IZF2 1346 aa6.73□□□□□ -1.33
SF1-217ENST00000486960 ITGB4P16144 1822 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 AFDNP55196 1824 aaKnown RBP6.72□□□□□ -1.33
SF1-217ENST00000486960 ICMTO60725 284 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 APPP05067 770 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 GTF2E1P29083 439 aaPredicted RBP6.72□□□□□ -1.33
SF1-217ENST00000486960 CASP2P42575 452 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 PRIM1P49642 420 aaKnown RBP6.72□□□□□ -1.33
SF1-217ENST00000486960 TERF1P54274 439 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 CCDC184Q52MB2 194 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 GJC2Q5T442 439 aaPredicted RBP6.72□□□□□ -1.33
SF1-217ENST00000486960 Q7L0L9 218 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 RGL4Q8IZJ4 473 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 CNTROBQ8N137 903 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 TEX19Q8NA77 164 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 NGDNQ8NEJ9 315 aaKnown RBP6.72□□□□□ -1.33
SF1-217ENST00000486960 FAM200AQ8TCP9 573 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 TSR2Q969E8 191 aaKnown RBP6.72□□□□□ -1.33
SF1-217ENST00000486960 SLC39A13Q96H72 371 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 DDX21Q9NR30 783 aaKnown RBP eCLIP6.72□□□□□ -1.33
SF1-217ENST00000486960 PUF60Q9UHX1 559 aaKnown RBP6.72□□□□□ -1.33
SF1-217ENST00000486960 HDAC5Q9UQL6 1122 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 NSD3Q9BZ95 1437 aa6.72□□□□□ -1.33
SF1-217ENST00000486960 ANKRD36BQ8N2N9 1353 aa6.71□□□□□ -1.33
SF1-217ENST00000486960 WDFY4Q6ZS81 3184 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 FAM196BA6NMK8 535 aa6.71□□□□□ -1.34
SF1-217ENST00000486960 LHX8Q68G74 356 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms