RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 SLC16A10Q8TF71 515 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 ESR2Q92731 530 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 ZNF287Q9HBT7 754 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 GOLGA8BA8MQT2 603 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 PATL2C9JE40 543 aaKnown RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 E7EWF7 191 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 IFIT3O14879 490 aaKnown RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 RANBP6O60518 1105 aaKnown RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 CHGBP05060 677 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 HOXA10P31260 410 aaPredicted RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 HMGN5P82970 282 aaKnown RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 PDE4BQ07343 736 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 TRIM29Q14134 588 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 SLFNL1Q499Z3 407 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 AMIGO3Q86WK7 504 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 IQCA1Q86XH1 822 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 SP8Q8IXZ3 490 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 NECAB1Q8N987 351 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 TNPO1Q92973 898 aaKnown RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 KLF18A0A0U1RQI7 1052 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 KDM4AO75164 1064 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 CERS3Q8IU89 383 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 IFNL3Q8IZI9 196 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 STRBPQ96SI9 672 aaKnown RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 GLI3P10071 1580 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 F8W031 263 aaPredicted RBP5.35□□□□□ -1.55
RGPD5-209ENST00000477523 IGSF3O75054 1194 aa5.35□□□□□ -1.55
RGPD5-209ENST00000477523 GTF2IP78347 998 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 GPSM2P81274 684 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 DDX11Q96FC9 970 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 MCM9Q9NXL9 1143 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 TMOD2Q9NZR1 351 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 NWD2Q9ULI1 1742 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 GJB2P29033 226 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 TMEM67Q5HYA8 995 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 FBXO33Q7Z6M2 555 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 CCDC125Q86Z20 511 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 TRIM22Q8IYM9 498 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 LCORLQ8N3X6 602 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 AKT1S1Q96B36 256 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 GPR101Q96P66 508 aaPredicted RBP5.34□□□□□ -1.55
RGPD5-209ENST00000477523 GZF1Q9H116 711 aaPredicted RBP5.34□□□□□ -1.55
RGPD5-209ENST00000477523 MKNK2Q9HBH9 465 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 CD209Q9NNX6 404 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 AATFQ9NY61 560 aaKnown RBP eCLIP5.34□□□□□ -1.55
RGPD5-209ENST00000477523 ATP6V0A2Q9Y487 856 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 SLC12A7Q9Y666 1083 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 TBC1D16Q8TBP0 767 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 ANP32BQ92688 251 aaKnown RBP5.34□□□□□ -1.55
RGPD5-209ENST00000477523 GOLGA8AA7E2F4 631 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 SRGNP10124 158 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 PRDX5P30044 214 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 CCT2P78371 535 aaKnown RBP5.34□□□□□ -1.55
RGPD5-209ENST00000477523 AKNAD1Q5T1N1 836 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 SYAP1Q96A49 352 aaPredicted RBP5.34□□□□□ -1.55
RGPD5-209ENST00000477523 COA1Q9GZY4 146 aa5.34□□□□□ -1.55
RGPD5-209ENST00000477523 STX6O43752 255 aa5.34□□□□□ -1.56
RGPD5-209ENST00000477523 FOSBP53539 338 aa5.34□□□□□ -1.56
RGPD5-209ENST00000477523 APOBRQ0VD83 1088 aa5.34□□□□□ -1.56
RGPD5-209ENST00000477523 TSGA10IPQ3SY00 556 aa5.34□□□□□ -1.56
RGPD5-209ENST00000477523 CHST3Q7LGC8 479 aa5.34□□□□□ -1.56
RGPD5-209ENST00000477523 FERMT3Q86UX7 667 aa5.34□□□□□ -1.56
RGPD5-209ENST00000477523 TEX11Q8IYF3 940 aa5.34□□□□□ -1.56
RGPD5-209ENST00000477523 CCDC196A0A1B0GTZ2 297 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 B4E1Z4 1266 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 KLRK1P26718 216 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 PPARAQ07869 468 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 WTAPQ15007 396 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 RAB3GAP1Q15042 981 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 MICU3Q86XE3 530 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 TMTC2Q8N394 836 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 TMEM87BQ96K49 555 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 PNPLA7Q6ZV29 1317 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 TSPY2A6NKD2 308 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 PRKAB2O43741 272 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 PRDM1O75626 825 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 SAFBQ15424 915 aaKnown RBP eCLIP5.33□□□□□ -1.56
RGPD5-209ENST00000477523 CRY2Q49AN0 593 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 ZSCAN29Q8IWY8 852 aaPredicted RBP5.33□□□□□ -1.56
RGPD5-209ENST00000477523 ANO8Q9HCE9 1232 aaPredicted RBP5.33□□□□□ -1.56
RGPD5-209ENST00000477523 RPAP1Q9BWH6 1393 aaPredicted RBP5.33□□□□□ -1.56
RGPD5-209ENST00000477523 ZNF444Q8N0Y2 327 aaPredicted RBP5.33□□□□□ -1.56
RGPD5-209ENST00000477523 LARGE2Q8N3Y3 721 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 JDP2Q8WYK2 163 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 CAMKK2Q96RR4 588 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 ARPP21Q9UBL0 812 aaPredicted RBP5.33□□□□□ -1.56
RGPD5-209ENST00000477523 PPIP5K2O43314 1243 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 METAP2P50579 478 aaKnown RBP eCLIP5.33□□□□□ -1.56
RGPD5-209ENST00000477523 MECOMQ03112 1051 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 CUL4AQ13619 759 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 RAB11FIP4Q86YS3 637 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 TTLL6Q8N841 843 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 SDR42E1Q8WUS8 393 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 KCNB2Q92953 911 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 ATP8A2Q9NTI2 1148 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 ZBTB43O43298 467 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 FIBPO43427 364 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 CTDSPL2Q05D32 466 aa5.33□□□□□ -1.56
RGPD5-209ENST00000477523 DIXDC1Q155Q3 683 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms