RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	SEC31B	Q9NQW1	1179 aa		10.9	□□□□□ -0.66
MITF-205	ENST00000394348	GNL3L	Q9NVN8	582 aa	Known RBP	10.9	□□□□□ -0.66
MITF-205	ENST00000394348	ELP1	O95163	1332 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	RIOK3	O14730	519 aa	Known RBP	10.89	□□□□□ -0.67
MITF-205	ENST00000394348	GNPAT	O15228	680 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	FGA	P02671	866 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	MCM5	P33992	734 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	UBE2H	P62256	183 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	FGD1	P98174	961 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	RASGRF1	Q13972	1273 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	ZSCAN23	Q3MJ62	389 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	LARP1B	Q659C4	914 aa	Known RBP	10.89	□□□□□ -0.67
MITF-205	ENST00000394348	TBC1D9B	Q66K14	1250 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	PI16	Q6UXB8	463 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.89	□□□□□ -0.67
MITF-205	ENST00000394348	NECAB1	Q8N987	351 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	NCOA7	Q8NI08	942 aa		10.89	□□□□□ -0.67
MITF-205	ENST00000394348	ZNF532	Q9HCE3	1301 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	ZNF213	O14771	459 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	IDH1	O75874	414 aa	Known RBP	10.88	□□□□□ -0.67
MITF-205	ENST00000394348	XRCC6	P12956	609 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
MITF-205	ENST00000394348	SLFNL1	Q499Z3	407 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	SLC27A3	Q5K4L6	730 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	CAVIN1	Q6NZI2	390 aa	Known RBP	10.88	□□□□□ -0.67
MITF-205	ENST00000394348	TPTE2	Q6XPS3	522 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	SLC39A7	Q92504	469 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	BRF1	Q92994	677 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	TCEANC2	Q96MN5	208 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	NLRP3	Q96P20	1036 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	LARP6	Q9BRS8	491 aa	Known RBP	10.88	□□□□□ -0.67
MITF-205	ENST00000394348	MTA3	Q9BTC8	594 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	ANKRD2	Q9GZV1	360 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	METRN	Q9UJH8	293 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.88	□□□□□ -0.67
MITF-205	ENST00000394348	MAST2	Q6P0Q8	1798 aa		10.88	□□□□□ -0.67
MITF-205	ENST00000394348	SALL1	Q9NSC2	1324 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	UBR3	Q6ZT12	1888 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	DUOX1	Q9NRD9	1551 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	FAM177B	A6PVY3	158 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	PATL2	C9JE40	543 aa	Known RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	DHX16	O60231	1041 aa	Known RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	LETM1	O95202	739 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	KRT85	P78386	507 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	TRDN	Q13061	729 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	COL9A3	Q14050	684 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	NAA16	Q6N069	864 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	RALYL	Q86SE5	291 aa	Known RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	USP48	Q86UV5	1035 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	HELB	Q8NG08	1087 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	AIDA	Q96BJ3	306 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	STRBP	Q96SI9	672 aa	Known RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.87	□□□□□ -0.67
MITF-205	ENST00000394348	WWC3	Q9ULE0	1092 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	DENND2A	Q9ULE3	1009 aa		10.87	□□□□□ -0.67
MITF-205	ENST00000394348	TCHH	Q07283	1943 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	COL4A1	P02462	1669 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	VPS37C	A5D8V6	355 aa	Predicted RBP	10.86	□□□□□ -0.67
MITF-205	ENST00000394348	GTF2E1	P29083	439 aa	Predicted RBP	10.86	□□□□□ -0.67
MITF-205	ENST00000394348	HSPA1L	P34931	641 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	SCRN1	Q12765	414 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	CAVIN4	Q5BKX8	364 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	ATL3	Q6DD88	541 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	LRSAM1	Q6UWE0	723 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	SEPT12	Q8IYM1	358 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	NSUN7	Q8NE18	718 aa	Known RBP	10.86	□□□□□ -0.67
MITF-205	ENST00000394348	TMEM87B	Q96K49	555 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.86	□□□□□ -0.67
MITF-205	ENST00000394348	CNNM2	Q9H8M5	875 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	MINPP1	Q9UNW1	487 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	KIAA1551	Q9HCM1	1747 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	CHD4	Q14839	1912 aa		10.86	□□□□□ -0.67
MITF-205	ENST00000394348	PRC1	O43663	620 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	C7	P10643	843 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	PDIA3	P30101	505 aa	Known RBP	10.85	□□□□□ -0.67
MITF-205	ENST00000394348	NT5C2	P49902	561 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	RPS8	P62241	208 aa	Known RBP	10.85	□□□□□ -0.67
MITF-205	ENST00000394348	TRAPPC3L	Q5T215	181 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	CCDC183	Q5T5S1	534 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	TTLL5	Q6EMB2	1281 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	FAM196A	Q6ZSG2	479 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	C3orf67	Q6ZVT6	689 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	CDC37L1	Q7L3B6	337 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	PTF1A	Q7RTS3	328 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	FBXO33	Q7Z6M2	555 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	GAS2L3	Q86XJ1	694 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	MAGEB6	Q8N7X4	407 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	FAM184A	Q8NB25	1140 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	ARHGEF1	Q92888	912 aa	Known RBP	10.85	□□□□□ -0.67
MITF-205	ENST00000394348	NACAP1	Q9BZK3	213 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	TMEM63C	Q9P1W3	806 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	CNPY2	Q9Y2B0	182 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	NID2	Q14112	1375 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	MYH15	Q9Y2K3	1946 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.85	□□□□□ -0.67
MITF-205	ENST00000394348	CACNA1S	Q13698	1873 aa		10.85	□□□□□ -0.67
MITF-205	ENST00000394348	MYH13	Q9UKX3	1938 aa		10.84	□□□□□ -0.67
MITF-205	ENST00000394348	MBD4	O95243	580 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms