RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Ndufa8Q9DCJ5 172 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Atp8b3Q6UQ17 1335 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Zscan29E9Q5B4 869 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Prl3d1P18121 224 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cdk4P30285 303 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Mkrn3Q60764 544 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ncaph2Q8BSP2 607 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Plcd1Q8R3B1 756 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ube3bQ9ES34 1070 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Trip6Q9Z1Y4 480 aa12.21□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Carmil3Q3UFQ8 1375 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Snrpa1P57784 255 aaKnown RBP12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Plekhf1Q3TB82 279 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ifit1Q64282 463 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Smarcc2Q6PDG5 1213 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Rufy2Q8R4C2 606 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Zkscan3Q91VW9 553 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 NgdnQ9DB96 315 aaKnown RBP12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Sik3Q6P4S6 1311 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ubn2Q80WC1 1314 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 4931408C20RikE9PWP9 1381 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cyp2d9P11714 504 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 R3hcc1Q8BSI6 488 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Spata16Q8C636 571 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cgref1Q8R1U2 281 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Srgap1Q91Z69 1062 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Mrpl44Q9CY73 333 aaKnown RBP12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cep83Q9D5R3 692 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Mapk8ip1Q9WVI9 707 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Krt85Q9Z2T6 507 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Setdb1O88974 1307 aa12.2□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Lnx1O70263 728 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Klra1P20937 262 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Zfp51Q3U4L8 781 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Pla2g4fQ50L41 855 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Zfp317Q8C0Q5 607 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 ImmtQ8CAQ8 757 aaKnown RBP12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Pde3aQ9Z0X4 1141 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Spata31d1bE9QA57 1361 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Gm6588E9Q3K0 461 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Hap1O35668 628 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Tpd52l1O54818 204 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Tpm1P58771 284 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Vps33bP59016 617 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Pald1P70261 859 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cfap157Q0VFX2 523 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Podxl2Q8CAE9 603 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cnot6lQ8VEG6 555 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 EcsitQ9QZH6 435 aa12.19□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Myh7Q91Z83 1935 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Pcdhb9E9Q5G2 828 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 TrdnE9Q9K5 693 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Speer4dL7N216 212 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 NefhP19246 1090 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Adcy2Q80TL1 1090 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cep55Q8BT07 462 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Lmod1Q8BVA4 595 aa12.18□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Gm4340L7N2C4 268 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ppp1r1bQ60829 194 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Pram1Q6BCL1 675 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ufl1Q8CCJ3 793 aaKnown RBP12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 PdcQ9QW08 244 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Lrp5Q91VN0 1614 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Vmn2r23E9PXI5 849 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Rgs9O54828 675 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Smarcc1P97496 1104 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Zc3h12cQ5DTV4 884 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Il17raQ60943 864 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 TrhQ62361 256 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 RbsnQ80Y56 783 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Fsd2Q8BZ52 692 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Tmem143Q8VD26 458 aa12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Utp3Q9JI13 469 aaKnown RBP12.17□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Col3a1P08121 1464 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Serpinb6bO08804 377 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Npdc1Q64322 332 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Acap3Q6NXL5 833 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Slc5a4bQ91ZP4 660 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Bicd2Q921C5 820 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Popdc2Q9ES82 367 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Mroh6V9GX81 722 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Prr29B1ARI9 187 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cfap73J3QPZ5 306 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 MycnP03966 462 aaKnown RBP12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Paxbp1P58501 919 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Kmt5bQ3U8K7 883 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Washc4Q3UMB9 1173 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Tmem59lQ7TNI2 337 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Alg3Q8K2A8 438 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Trim59Q922Y2 403 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Saal1Q9D2C2 474 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ifi35Q9D8C4 286 aa12.16□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Wdr33Q8K4P0 1330 aaKnown RBP12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Irx2P81066 474 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Snai1Q02085 264 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Prdm1Q60636 856 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Snx13Q6PHS6 957 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Abtb2Q7TQI7 1024 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 SowahdQ8BY98 327 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Alx1Q8C8B0 326 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms