RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Osbpl5Q9ER64 874 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Uchl5Q9WUP7 329 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Apbb1ipQ8R5A3 670 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Col4a3bpQ9EQG9 624 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Eme2Q56A04 373 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 IqcgQ80W32 419 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Zfp202Q8C879 641 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Sf3a3Q9D554 501 aaKnown RBP10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Diaph1O08808 1255 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Zmat2Q9CPW7 199 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 RarsQ9D0I9 660 aaKnown RBP10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 ParvgQ9ERD8 331 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Setd1bQ8CFT2 1985 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Slc1a4O35874 532 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Clec11aO88200 328 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Sgsm2Q80U12 1005 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ranbp6Q8BIV3 1105 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Taf5lQ91WQ5 589 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Xpo4Q9ESJ0 1151 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Akr1c19G3X9Y6 323 aa10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Polr2dQ9D7M8 142 aaKnown RBP10.41□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Gm5624F6ZZG8 207 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Znf608Q56A10 1511 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Mxra7Q9CZH7 178 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Uggt2E9Q4X2 1504 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Sult6b1P0CC03 303 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Fez2Q6TYB5 348 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 RbsnQ80Y56 783 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Armc9Q9D2I5 817 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Egfl6Q9JJZ5 550 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Abtb2Q7TQI7 1024 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ddx10Q80Y44 875 aaKnown RBP10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Sestd1Q80UK0 696 aa10.4□□□□□ -0.74
Scn8a-213ENSMUST00000201549 Ncaph2Q8BSP2 607 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Q8BZJ8 459 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Exoc1Q8R3S6 894 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Smtnl1Q99LM3 459 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Zfpm1O35615 995 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Casp1P29452 402 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cnnm2Q3TWN3 875 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tgfb1i1Q62219 461 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Taf12Q8VE65 161 aa10.4□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Samd15F6XZJ7 620 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ankrd13dQ6PD24 605 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Nek5Q7TSC3 627 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Sept14Q9DA97 430 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Adgrl1Q80TR1 1466 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Trpm2Q91YD4 1506 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Rrp1P56183 494 aaKnown RBP10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Top1Q04750 767 aaKnown RBP10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Map3k11Q80XI6 850 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Wdr3Q8BHB4 942 aaKnown RBP10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Als2cr12Q8BVM7 383 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tmem143Q8VD26 458 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Izumo3A6PWV3 263 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ugt1a5B2RT14 529 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tom1O88746 492 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 MarcksP26645 309 aaKnown RBP10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Sh3bp1P55194 680 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Eif4a1P60843 406 aaKnown RBP10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 MycbpapQ5SUV2 932 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Znf18Q810A1 556 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ufl1Q8CCJ3 793 aaKnown RBP10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Slc14a2Q8R4T9 930 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Hsf2bpQ9D4G2 338 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Prl3d3A0A0M6L0J6 224 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Idi1P58044 227 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Gm28047Q3US59 414 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Atp1a4Q9WV27 1032 aa10.39□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Card6E9PWH2 1175 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Trak2Q6P9N8 913 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Zkscan8Q8BSL0 588 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 4930548H24RikQ9D496 437 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Drc3Q9D5E4 523 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tacc3Q9JJ11 631 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Pkd2l2Q9JLG4 621 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Plekhg2Q6KAU7 1340 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ranbp1P34022 203 aaKnown RBP10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Snx25Q3ZT31 840 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cul5Q9D5V5 780 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Disp3A3KFU9 1347 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Itsn2Q9Z0R6 1659 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cetn1P41209 172 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Igsf3Q6ZQA6 1194 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tulp1Q9Z273 543 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Lrrc23O35125 340 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Rbm42Q91V81 474 aaKnown RBP10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Lztfl1Q9JHQ5 299 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Setbp1Q9Z180 1582 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Ccdc121E9Q6D3 323 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Art2aP17981 287 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Jade3Q6IE82 823 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 TxlnaQ6PAM1 554 aaKnown RBP10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Kcnh3Q9WVJ0 1095 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Lekr1B2RVN1 116 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Tcp11l1Q8BTG3 509 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Nap1l5Q9JJF0 156 aa10.38□□□□□ -0.75
Scn8a-213ENSMUST00000201549 SsbP32067 415 aaKnown RBP10.37□□□□□ -0.75
Scn8a-213ENSMUST00000201549 Cspg5Q71M36 566 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms