RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Ubac1Q8VDI7 409 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 Atad3Q925I1 591 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 Stim2P83093 746 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 Nlgn1Q99K10 843 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 IqcdQ9D3V1 458 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 FibpQ9JI19 357 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 Trpc3Q9QZC1 836 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cdc42bpgQ80UW5 1551 aa10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 CltcQ68FD5 1675 aaKnown RBP10.12□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ift81O35594 676 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Nlrp2Q4PLS0 1046 aaKnown RBP10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Vat1lQ80TB8 417 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Parp10Q8CIE4 960 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cuedc2Q9CXX9 284 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 CenppQ9CZ92 286 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Calml3Q9D6P8 149 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Dnajc7Q9QYI3 494 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 DmtnQ9WV69 405 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Scaf11E9PZM7 1456 aaKnown RBP10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Rabgap1A2AWA9 1064 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Mum1Q6DID5 682 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Rfwd2Q9R1A8 733 aaKnown RBP10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Gpr161B2RPY5 545 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Krt77Q6IFZ6 572 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Paxip1Q6NZQ4 1056 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Kdm8Q9CXT6 414 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Knl1Q66JQ7 1612 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cct4P80315 539 aaKnown RBP10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ccdc92Q8VDN4 314 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Uba5Q8VE47 403 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Acot11Q8VHQ9 594 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Slc27a3O88561 667 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Card10P58660 1021 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Zbtb41Q811F1 908 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Znf622Q91VY9 476 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 PdiltQ9DAN1 588 aa10.11□□□□□ -0.79
Lig3-211ENSMUST00000173722 Eef1dP57776 281 aaKnown RBP10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Map4k4P97820 1233 aaKnown RBP10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ubash3aQ3V3E1 624 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Smc6Q924W5 1097 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Rmi1Q9D4G9 616 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Fmnl1Q9JL26 1094 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 SufuQ9Z0P7 484 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Mug2P28666 1451 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 4933406M09RikG3XA12 479 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cdr2P97817 455 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Patl1Q3TC46 770 aaKnown RBP10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Trim32Q8CH72 655 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ankrd1Q9CR42 319 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Dpp7Q9ET22 506 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Plekho1Q9JIY0 408 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cdk13Q69ZA1 1511 aaKnown RBP10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Gbp6A0A0G2JDV3 611 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Gm6588E9Q3K0 461 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ccdc85cE9Q6B2 420 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Gm43302L7N1X8 611 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Rnaseh1O70338 285 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 GnaqP21279 359 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cep128Q8BI22 1102 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cep83Q9D5R3 692 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Bnip3lQ9Z2F7 218 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Nphp4P59240 1425 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Inf2Q0GNC1 1273 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Rab34Q64008 259 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Fmnl3Q6ZPF4 1028 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Lin9Q8C735 542 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 GptQ8QZR5 496 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Setdb1O88974 1307 aa10.1□□□□□ -0.79
Lig3-211ENSMUST00000173722 Klhl34A2AI76 644 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Xbp1O35426 267 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Hoxc9P09633 260 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Syne3Q4FZC9 975 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Tom1l2Q5SRX1 507 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 RragbQ6NTA4 374 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Slc35g1Q8BY79 368 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ccdc38Q8CDN8 563 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Med10Q9CXU0 135 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Krt19P19001 403 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Leo1Q5XJE5 667 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Znf365Q8BG89 408 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Amotl1Q9D4H4 968 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Mrpl12Q9DB15 201 aaKnown RBP10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Pfdn6Q03958 127 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ranbp6Q8BIV3 1105 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Fam186bD3Z420 943 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Tcerg1lQ3B807 590 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Kiaa1841Q68FF0 718 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Fez2Q6TYB5 348 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Gbp5Q8CFB4 590 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Thap12Q9CUX1 758 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Nckap5lQ6GQX2 1323 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Cpsf1Q9EPU4 1441 aaKnown RBP10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 4930407I10RikD3Z5T8 1512 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 ChkbO55229 394 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Kifap3P70188 793 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Rtel1Q0VGM9 1203 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Ccdc12Q8R344 166 aaKnown RBP10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Vps16Q920Q4 839 aa10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 Bag3Q9JLV1 577 aaKnown RBP10.09□□□□□ -0.79
Lig3-211ENSMUST00000173722 RpgrQ9R0X5 1001 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms