RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Gli3Q61602 1583 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Nrxn3Q6P9K9 1571 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Nrg3O35181 713 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Lrrc42Q8R2U7 421 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 PigoQ9JJI6 1093 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 ErmapQ9JLN5 566 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Uhrf1bp1lA2RSJ4 1457 aa11.63□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Abca8aQ8K442 1620 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Emc10Q3TAS6 258 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 RpainQ9CWY9 219 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Stxbp4Q9WV89 557 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Cacna2d1O08532 1103 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 ItgadQ3V0T4 1168 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Prpf38aQ4FK66 312 aaKnown RBP11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Slc30a9Q5IRJ6 567 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 LnpkQ7TQ95 425 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 BaatQ91X34 420 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ppp4r3bQ922R5 820 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Dnajc21E9Q8D0 531 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ppp1r15aP17564 657 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ddr1Q03146 911 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Rnf187Q8BFX1 236 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Atf7Q8R0S1 413 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Msantd4Q91YU3 345 aa11.62□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Folh1O35409 752 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 RcvrnP34057 202 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 IntuQ059U7 942 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Rap1gap2Q5SVL6 712 aaKnown RBP11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ovgp1Q62010 721 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Btbd11Q6GQW0 1109 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Rrp1bQ91YK2 724 aaKnown RBP11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Mei1Q9D4I2 1268 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Slc4a10Q5DTL9 1118 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Pde1cQ64338 706 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Eno4Q8C042 619 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Dusp9Q7TNL7 452 aa11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Nop2Q922K7 793 aaKnown RBP11.61□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Myo1aO88329 1043 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Sf3b2Q3UJB0 878 aaKnown RBP11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Bbof1Q3V079 533 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Usp13Q5BKP2 858 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 A1cfQ5YD48 595 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Hgh1Q8C3I8 393 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 LgsnQ8CIX8 563 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Tmc2Q8R4P4 888 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Actn2Q9JI91 894 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Tmem131lQ3U3D7 1597 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Iqgap3F8VQ29 1632 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Eif5P59325 429 aaKnown RBP11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Sco1Q5SUC9 284 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 CtcfQ61164 736 aaKnown RBP11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ddx42Q810A7 929 aaKnown RBP11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 PreplQ8C167 725 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Sstr3P30935 428 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Fmnl3Q6ZPF4 1028 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Cep120Q7TSG1 988 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Iws1Q8C1D8 766 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Vps37cQ8R105 352 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ankrd1Q9CR42 319 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Pramel3A2AHA7 463 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Gm7903A2AWL1 463 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 AV320801A2AWL3 467 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Gm15023L7MUB4 467 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Cdr2P97817 455 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Nlrp4fQ66X05 959 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Smim5Q8BT42 78 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Klhl30Q8C3F7 581 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Spats2Q8K1N4 545 aaKnown RBP11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 MypopQ8R4U1 393 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Large1Q9Z1M7 756 aa11.6□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Frmpd2A0A140LI67 1392 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 BcrQ6PAJ1 1270 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Lmod1Q8BVA4 595 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 AopepQ8BXQ6 817 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Armc9Q9D2I5 817 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Tcof1O08784 1320 aaKnown RBP11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Stim1P70302 685 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Cep112Q5PR68 954 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Fam163bQ8BUM6 167 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Lztfl1Q9JHQ5 299 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Stat2Q9WVL2 923 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 TrdnE9Q9K5 693 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Myo1bP46735 1107 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Mnat1P51949 309 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Cct4P80315 539 aaKnown RBP11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Atp11aP98197 1187 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Ubxn10Q8BG34 277 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Adcy3Q8VHH7 1145 aa11.59□□□□□ -0.55
Ctc1-202ENSMUST00000116359 Stk36Q69ZM6 1316 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Ppp1r10Q80W00 888 aaKnown RBP11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 ToporslQ9D2F8 683 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Knop1Q9Z2Q2 478 aaKnown RBP11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 AceP09470 1312 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Myo3bQ1EG27 1305 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 A0A1W2P6Q8 802 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Gm9048A0A1W2P7H4 802 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 A0A1W2P7S8 802 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 A0A1W2P7Z8 802 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 Gm9046A0A1W2P855 802 aa11.58□□□□□ -0.56
Ctc1-202ENSMUST00000116359 E9QMW4 1145 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms