RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Lrrc74aA0A1Y7VMD6 494 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Tbc1d32Q3URV1 1296 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 DbnlQ62418 436 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Hspa8P63017 646 aaKnown RBP20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 LnpkQ7TQ95 425 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Maip1Q8BHE8 291 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Arhgap18Q8K0Q5 663 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Polr3cQ9D483 533 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Cep85lA0A1W2P884 806 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Snx13Q6PHS6 957 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 GabpaQ00422 454 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Osbpl1aQ91XL9 950 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Bbs5Q9CZQ9 341 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Bag3Q9JLV1 577 aaKnown RBP20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Pja2Q80U04 707 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Aldh1l1Q8R0Y6 902 aa20.46■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rtl9Q32KG4 1339 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Arhgef9Q3UTH8 516 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Taf12Q8VE65 161 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Tbc1d7Q9D0K0 293 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Myo18aQ9JMH9 2050 aaKnown RBP20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ccdc162pQ0VG85 912 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 LgsnQ8CIX8 563 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Serpini1O35684 410 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ttll12Q3UDE2 639 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Mindy4Q3UQI9 744 aa20.45■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ano6Q6P9J9 911 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Gm15262A0A140LIQ5 728 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 GnaqP21279 359 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Lonp2Q9DBN5 852 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 CltaO08585 235 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Leo1Q5XJE5 667 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 GpkowQ56A08 488 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Retreg2Q6NS82 541 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ppfia1B2RXQ2 1266 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Sun3Q5SS91 320 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 AticQ9CWJ9 592 aaKnown RBP20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Tmem87bQ8BKU8 555 aa20.44■□□□□ 0.86
Trim71-201ENSMUST00000111816 Zkscan4Q5SZT6 480 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ccdc28aQ8CEI3 192 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Dnm1P39053 867 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 ScocQ78YZ6 125 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Capn12Q9ER56 720 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Stoml1Q8CI66 399 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 AsphQ8BSY0 741 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Slc1a4O35874 532 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ulk3Q3U3Q1 472 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Arhgap30Q640N3 1101 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ankrd2Q9WV06 328 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Stat1P42225 749 aa20.43■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ppp1r7Q3UM45 361 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Acbd5Q5XG73 508 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Map3k10Q66L42 940 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 AatfQ9JKX4 526 aaKnown RBP20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ppp2r5eQ61151 467 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Nlrp4fQ66X05 959 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 SpopQ6ZWS8 374 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Efcab8Q8C9R9 203 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Syf2Q9D198 242 aaKnown RBP20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Gimap9G3X987 291 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Utp11Q9CZJ1 253 aaKnown RBP20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ccdc33Q3ULW6 985 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Triml1Q8BVP1 470 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Nkiras1Q8CEC5 192 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Eif3bQ8JZQ9 803 aaKnown RBP20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Pde9aO70628 534 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Micall2Q3TN34 1009 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Gm4981Q3ULJ8 291 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Serpinb6Q60854 378 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Rcn2Q8BP92 320 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Zbtb43Q9DAI4 467 aa20.42■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ift81O35594 676 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Fam207aP58468 219 aaKnown RBP20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Myom3A2ABU4 1439 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Mpp4Q6P7F1 635 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Nop9Q8BMC4 636 aaKnown RBP20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 PawrQ925B0 333 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Rapgef2Q8CHG7 1496 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Tmtc1Q3UV71 942 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Atp1a2Q6PIE5 1020 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Tpcn1Q9EQJ0 817 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Slc12a2P55012 1205 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 PhbP67778 272 aaKnown RBP20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Myh11O08638 1972 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Gm44G3UW88 330 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Evi5P97366 809 aa20.41■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ppp2r3dQ9Z176 491 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Cd72P21855 354 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Ppp1r1bQ60829 194 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 PrimpolQ6P1E7 537 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 WtapQ9ER69 396 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Surf6P70279 355 aaKnown RBP20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Mrpl40Q9Z2Q5 206 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Kdm1aQ6ZQ88 853 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Lin9Q8C735 542 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Pspc1Q8R326 523 aaKnown RBP20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Gm5935Q497S0 212 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Exoc3Q6KAR6 755 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Palm2Q8BR92 376 aa20.4■□□□□ 0.86
Trim71-201ENSMUST00000111816 Rtel1Q0VGM9 1203 aa20.39■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms