RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Myh15E9Q264 1925 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Il17raQ60943 864 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Tut1Q8R3F9 869 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Cdca7lQ922M5 438 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Vsig10D3YX43 558 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Psmd14O35593 310 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Tom1l2Q5SRX1 507 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Ttc12Q8BW49 704 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Cnot6lQ8VEG6 555 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Hap1O35668 628 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Tbc1d2bQ3U0J8 965 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 AsnsQ61024 561 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Atf7Q8R0S1 413 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Q9D9S1 216 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Efcc1Q9JJF6 558 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Dennd3A2RT67 1274 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Glt1d1A4FUP9 346 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Gm10093D3YYI8 482 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 D830030K20RikE9PYQ5 218 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Gm3043K7N693 218 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Gm16440K7N6G6 218 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Gm2244L7N2A3 218 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Gm3278L7N2D2 218 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Gm8271L7N2E2 218 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Hdac1O09106 482 aaKnown RBP11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Dnajc2P54103 621 aaKnown RBP11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 EvcP57680 1005 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Ubxn10Q8BG34 277 aa11.8□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Ccdc158Q8CDI6 1109 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Add2Q9QYB8 725 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Col20a1Q923P0 1320 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Sptbn5F6UCX4 1208 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Map9Q3TRR0 646 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Usp48Q3V0C5 1052 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Nell2Q61220 819 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Lbhd1A0A087WPA0 259 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Ms4a2P20490 235 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Mum1l1Q4VA55 681 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 HelbQ6NVF4 1074 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Pof1bQ8K4L4 587 aa11.79□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Grem2O88273 168 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Ppfia3P60469 1194 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Pramel6Q810Y9 485 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 WdpcpQ8C456 722 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Jag1Q9QXX0 1218 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Eif6O55135 245 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 D1Pas1P16381 660 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 1700010I14RikQ7TPG0 532 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Adck5Q80V03 582 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 ImmtQ8CAQ8 757 aaKnown RBP11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Eaf2Q91ZD6 262 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Epb41l3Q9WV92 929 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Prdm1Q60636 856 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Nup133Q8R0G9 1155 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Pik3ap1Q9EQ32 811 aa11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Psma5Q9Z2U1 241 aaKnown RBP11.78□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Zfp831A2ADM8 1628 aa11.77□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Scn11aQ9R053 1765 aa11.77□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 CrkQ64010 304 aa11.77□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Gnat2P50149 354 aa11.77□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ipo9Q91YE6 1041 aa11.77□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Adgra3Q7TT36 1310 aa11.77□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Myl10Q62082 202 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Gm2163Q6PCY5 473 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 1700018B08RikQ9DA83 213 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Frmd7A2AD83 703 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Bnip3O55003 187 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ccdc93Q7TQK5 629 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Tti2Q8BGV4 512 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Hdac9Q99N13 588 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Btaf1E9QAE3 1848 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Dpf2Q61103 391 aaKnown RBP11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Sgsm2Q80U12 1005 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Mrps27Q8BK72 415 aaKnown RBP11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 AnlnQ8K298 1121 aaKnown RBP11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Tmc1Q8R4P5 757 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Zbtb43Q9DAI4 467 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Hmg20bQ9Z104 317 aa11.76□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Sik3Q6P4S6 1311 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ces1aE9PYP1 563 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Anapc15P60007 132 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ppp1r9bQ6R891 817 aaKnown RBP11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Ints3Q7TPD0 1041 aaKnown RBP11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Otop3Q80UF9 577 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Fsd2Q8BZ52 692 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Usp44Q8C2S0 711 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Tbc1d23Q8K0F1 684 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Iffo2Q8R2V2 512 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 LlphQ9D945 130 aaKnown RBP11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Usp42B2RQC2 1324 aaKnown RBP11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Filip1lQ6P6L0 1131 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Krt84Q99M73 603 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Nup188Q6ZQH8 1759 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 CfhP06909 1234 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 SpidrQ8BGX7 933 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Pms1Q8K119 917 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Dynll2Q9D0M5 89 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Odf2lQ9D478 642 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Sept14Q9DA97 430 aa11.75□□□□□ -0.53
Ccdc38-201ENSMUST00000092215 Spata5Q3UMC0 893 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms