RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Adcy3Q8VHH7 1145 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Atp1a4Q9WV27 1032 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Klhl10Q9D5V2 608 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Podxl2Q8CAE9 603 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 RestQ8VIG1 1082 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Slx4ipQ9D7Y9 413 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Col4a3bpQ9EQG9 624 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ak2Q9WTP6 239 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Retreg2Q6NS82 541 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Syap1Q9D5V6 365 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Znf518aB2RRF6 1478 aaKnown RBP11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Plekhg1F6S200 1446 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Usp19Q3UJD6 1360 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Trak2Q6P9N8 913 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Galnt17Q7TT15 598 aa11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Nip7Q9CXK8 180 aaKnown RBP11.73□□□□□ -0.53
Scn8a-201ENSMUST00000082209 NapgQ9CWZ7 312 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Anp32cQ64G17 123 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Gucy1a3Q9ERL9 691 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Vamp4O70480 141 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Clcn1Q64347 994 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Tcp11l1Q8BTG3 509 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ccdc28aQ8CEI3 192 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Emilin2Q8K482 1074 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Prl3d3A0A0M6L0J6 224 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Bpifb4A2BGH0 617 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Mtus1Q5HZI1 1210 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Cnnm4Q69ZF7 771 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Cep128Q8BI22 1102 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Lrrc74aA0A1Y7VMD6 494 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 ZfxP17012 799 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Rfc1P35601 1131 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Fbln2P37889 1221 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Dact3Q0PHV7 610 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Map3k11Q80XI6 850 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Speer4f2E9Q366 295 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ccdc38Q8CDN8 563 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ints8Q80V86 995 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Lmbr1lQ9D1E5 489 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Zkscan5Q9Z1D8 819 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Sall3Q62255 1320 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ifit1bl2Q3U687 466 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Ccpg1Q640L3 753 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 KaznQ69ZS8 779 aa11.72□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Catsper2A2ARP9 588 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 EnahQ03173 802 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Sun3Q5SS91 320 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Efcab2Q9CQ46 164 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Stmn2P55821 179 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Snrpa1P57784 255 aaKnown RBP11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 PrphP15331 475 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Asic3Q6X1Y6 530 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Tti2Q8BGV4 512 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Fam204aQ8C6C7 236 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Gm2030D3Z7C4 212 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Rfwd2Q9R1A8 733 aaKnown RBP11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Mmp8O70138 465 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Depdc1bQ8BH88 529 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 SncbQ91ZZ3 133 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Golga1Q9CW79 758 aa11.71□□□□□ -0.53
Scn8a-201ENSMUST00000082209 Lin9Q8C735 542 aa11.71□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Tldc2A2ACG1 198 aa11.71□□□□□ -0.54
Scn8a-201ENSMUST00000082209 PsdQ5DTT2 1024 aa11.71□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Oas2E9Q9A9 742 aa11.71□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Mybl2P48972 704 aa11.71□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Pdzrn3Q69ZS0 1063 aa11.71□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Zbtb3Q91X45 518 aa11.71□□□□□ -0.54
Scn8a-201ENSMUST00000082209 VeztQ3ZK22 780 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ccdc82Q6PG04 518 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Angptl3Q9R182 455 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ncf1Q09014 390 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ssx2ipQ8VC66 615 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Golga5Q9QYE6 729 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ccdc155Q80VJ8 648 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Mterf4Q8BVN4 346 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Nup58Q8R332 587 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ribc1Q9D0B8 379 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cacna2d3Q9Z1L5 1091 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Mcm5P49718 733 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cep170Q6A065 1588 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gm16486A0A1D5RMD1 1434 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ppfia3P60469 1194 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Prpf40bQ80W14 870 aa11.7□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Stim2P83093 746 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Tcerg1lQ3B807 590 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Cyp4f39Q8BGU0 532 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Ttc27Q8CD92 847 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Rims1Q99NE5 1463 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Rbm12b2Q66JV4 834 aaKnown RBP11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Plcd3Q8K2J0 785 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Zkscan16A2ALW2 728 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Rnf216P58283 853 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Rab34Q64008 259 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Krt77Q6IFZ6 572 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gigyf1Q99MR1 1044 aaKnown RBP11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Trim60Q8VI40 466 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Aox4Q3TYQ9 1336 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Zap70P43404 618 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Sox13Q04891 613 aa11.69□□□□□ -0.54
Scn8a-201ENSMUST00000082209 Gas2l2Q5SSG4 860 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms