RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Cyp3a57D3YYZ0 503 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Gm973E9Q295 1059 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Shank2Q80Z38 1476 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Akap11E9Q777 1895 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Dnajc25A2ALW5 357 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Lipo1J3QME6 396 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Phf20l1Q8CCJ9 1013 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ttc27Q8CD92 847 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ubxn4Q8VCH8 506 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 SetQ9EQU5 289 aaKnown RBP12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 TrdnE9Q9K5 693 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cops6O88545 324 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Llgl2Q3TJ91 1027 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Sptlc3Q8BG54 563 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Znf526Q8BI66 675 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Kcnk13Q8R1P5 405 aa12.36□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Me1P06801 572 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Dnm1P39053 867 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 XpcP51612 930 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Nbr1P97432 988 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ap5z1Q3U829 807 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ccz1Q8C1Y8 480 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tomm22Q9CPQ3 142 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Iqca1Q9CUL5 857 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ybx3Q9JKB3 361 aaKnown RBP12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Bin2D3Z6Q9 489 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Nlrp9aQ66X03 949 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Zbtb1Q91VL9 713 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tlcd1Q99JT6 247 aa12.35□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Tiam2Q6ZPF3 1715 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Zscan29E9Q5B4 869 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Stx1aO35526 288 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Mtx1P47802 317 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Cplx1P63040 134 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Washc4Q3UMB9 1173 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ncaph2Q8BSP2 607 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Trim59Q922Y2 403 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 4930548H24RikQ9D496 437 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Abl1P00520 1123 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Slc7a3P70423 618 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Slu7Q8BHJ9 585 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Npc1l1Q6T3U4 1333 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Clec11aO88200 328 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Pald1P70261 859 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Luzp1Q8R4U7 1068 aaKnown RBP12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Ddx41Q91VN6 622 aaKnown RBP12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Chaf1aQ9QWF0 911 aa12.34□□□□□ -0.43
Ptcd1-201ENSMUST00000031628 Kcnh4A2A5F7 1018 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Cyp26a1O55127 497 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Dhx40Q6PE54 779 aaKnown RBP12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Pcdhgc5Q91XW9 944 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Bcl2l12Q9D3J3 255 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Appbp2Q9DAX9 585 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 IcoslgQ9JHJ8 322 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Dctn1O08788 1281 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Frat1P70339 274 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Sptlc2P97363 560 aaKnown RBP12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 TfrcQ62351 763 aaKnown RBP12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Dcaf5Q80T85 946 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ano10Q8BH79 659 aa12.33□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Lcmt1A0A0U1RNF2 332 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Tpcn2Q8BWC0 731 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Q8BZJ8 459 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ifi35Q9D8C4 286 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ehd4Q9EQP2 541 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Efcc1Q9JJF6 558 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Zeb2Q9R0G7 1215 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Large1Q9Z1M7 756 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Tcof1O08784 1320 aaKnown RBP12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Crb1Q8VHS2 1405 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Agtpbp1Q641K1 1218 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ces1dQ8VCT4 565 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Zbtb43Q9DAI4 467 aa12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Acot9Q9R0X4 439 aaKnown RBP12.32□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Pcdhb9E9Q5G2 828 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Metap2O08663 478 aaKnown RBP12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Tnni2P13412 182 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Itga6Q61739 1091 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ube2oQ6ZPJ3 1288 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Lrrc8aQ80WG5 810 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Miga2Q8BK03 593 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Dnaaf2Q8BPI1 814 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 9230110C19RikQ8CC70 267 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Eaf2Q91ZD6 262 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Odf2lQ9D478 642 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 MycbpQ9EQS3 103 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Zbtb7aO88939 569 aaKnown RBP12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Rrp1P56183 494 aaKnown RBP12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Prpf4bQ61136 1007 aaKnown RBP12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Rec8Q8C5S7 591 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 AtrnQ9WU60 1428 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Shank3Q4ACU6 1730 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Zfp597E9Q6S0 419 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 L1td1Q587J6 782 aaKnown RBP12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Znf653Q6YND2 615 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Zfp202Q8C879 641 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 ImmtQ8CAQ8 757 aaKnown RBP12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Kcnj14Q8JZN3 434 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ciao1Q99KN2 339 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Xpo4Q9ESJ0 1151 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms