RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Zeb2Q9R0G7 1215 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Ssc5dQ8BV57 1371 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Nav1Q8CH77 1875 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Scn4aQ9ER60 1841 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Cdhr2E9Q7P9 1308 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Myh1Q5SX40 1942 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Casz1Q9CWL2 1761 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Cops6O88545 324 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Pde6aP27664 859 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Gm28047Q3US59 414 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Ces1dQ8VCT4 565 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Eaf2Q91ZD6 262 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 MbipQ99LQ1 341 aa21.34■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Dnajc25A2ALW5 357 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Znf568E9PYI1 671 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Surf1P09925 306 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Atp8a2P98200 1148 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 L1td1Q587J6 782 aaKnown RBP21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Usp13Q5BKP2 858 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Mylk2Q8VCR8 613 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Kcnq5Q9JK45 933 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Rgs12Q8CGE9 1381 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Naaladl2A0A0N4SUJ3 795 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Pcdhb14Q6PB90 796 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Zfp397Q7TNK4 527 aa21.33■■□□□ 1.01
Ccdc3-201ENSMUST00000027988 Metap2O08663 478 aaKnown RBP21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 LtkP08923 888 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Dnm1P39053 867 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Plcb3P51432 1234 aaKnown RBP21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Pla2g4fQ50L41 855 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Alx1Q8C8B0 326 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Zbtb1Q91VL9 713 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 IcoslgQ9JHJ8 322 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Magi2Q9WVQ1 1275 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Arap2Q8BZ05 1703 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Slx1bQ8BX32 270 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Zbtb43Q9DAI4 467 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 Stxbp4Q9WV89 557 aa21.32■■□□□ 1
Ccdc3-201ENSMUST00000027988 CoblQ5NBX1 1337 aaKnown RBP21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Larp6Q8BN59 492 aa21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Bola3Q8CEI1 110 aa21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Myh2G3UW82 1942 aa21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Sept1P42209 366 aa21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Gas2l3Q3UWW6 683 aa21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Glis3Q6XP49 780 aa21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Adam1bQ8R534 806 aa21.31■■□□□ 1
Ccdc3-201ENSMUST00000027988 Grin1P35438 938 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Cadps2Q8BYR5 1297 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Dnm3Q8BZ98 863 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Sirt2Q8VDQ8 389 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Ube3bQ9ES34 1070 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Greb1lB9EJV3 1913 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Atp8b5A3FIN4 1183 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Gm10134F6ZQC6 126 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Slc1a4O35874 532 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Kiaa0753Q6A000 959 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Srek1Q8BZX4 494 aaKnown RBP21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Elf2Q9JHC9 593 aa21.3■■□□□ 1
Ccdc3-201ENSMUST00000027988 Akap11E9Q777 1895 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Samsn1P57725 372 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Mei4Q8BRM6 389 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Odf2lQ9D478 642 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Cdc27A2A6Q5 825 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Pde8bE9Q4S1 865 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Cyp7a1Q64505 503 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Dcaf5Q80T85 946 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Haus7Q8BKT8 364 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Tmem87aQ8BXN9 555 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Pcdhb22Q91XZ8 794 aa21.29■■□□□ 1
Ccdc3-201ENSMUST00000027988 Pram1Q6BCL1 675 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Frat2Q8K025 231 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Kri1Q8VDQ9 704 aaKnown RBP21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Ddx27Q921N6 760 aaKnown RBP21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Dync1i1O88485 628 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Me1P06801 572 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Prl3d1P18121 224 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Plekhf1Q3TB82 279 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Ift57Q8BXG3 429 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 NenfQ9CQ45 171 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Hdac6Q9Z2V5 1149 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Kdm3aQ6PCM1 1323 aa21.28■■□□□ 1
Ccdc3-201ENSMUST00000027988 Krt24A1L317 512 aa21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 Dnajc2P54103 621 aaKnown RBP21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 Brinp3Q499E0 766 aa21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 9230110C19RikQ8CC70 267 aa21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 Suclg2Q9Z2I8 433 aa21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 Pde4bB1AWC9 736 aa21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 Filip1Q9CS72 1211 aa21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 Foxo4Q9WVH3 505 aa21.27■■□□□ 1
Ccdc3-201ENSMUST00000027988 PappaQ8R4K8 1624 aa21.26■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Cplx1P63040 134 aa21.26■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Kcnj14Q8JZN3 434 aa21.26■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 VeztQ3ZK22 780 aa21.26■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Rbm33Q9CXK9 1231 aaKnown RBP21.26■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ankrd31A0A140LI88 1765 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ubap1lG3UW59 384 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Rec8Q8C5S7 591 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Etnk1Q9D4V0 363 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Atp12aQ9Z1W8 1035 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Panx2Q6IMP4 677 aa21.25■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms