RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Tceanc2Q8R2M0 207 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tmc2Q8R4P4 888 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Cep57l1Q8VDS7 400 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Nop2Q922K7 793 aaKnown RBP10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 CenppQ9CZ92 286 aa10.49□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Klra1P20937 262 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 H2afxP27661 143 aaKnown RBP10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Hmgb1P63158 215 aaKnown RBP10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Adam1aQ60813 791 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tex35Q14BK3 207 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Mrps27Q8BK72 415 aaKnown RBP10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ccdc14Q8K2J4 934 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ino80Q6ZPV2 1559 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Arhgef28P97433 1693 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Nrg3O35181 713 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Nat1P50294 290 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Cplx1P63040 134 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ube2oQ6ZPJ3 1288 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Fnbp4Q6ZQ03 1031 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Lrsam1Q80ZI6 727 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Trpa1Q8BLA8 1125 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Fermt3Q8K1B8 665 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tceal9Q9DD24 104 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Capn15Q9JLG8 1095 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ppip5k1A2ARP1 1436 aa10.48□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Fyb1O35601 819 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 EmbP21995 330 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Dnaaf2Q8BPI1 814 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Usp40Q8BWR4 1235 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tbl3Q8C4J7 801 aaKnown RBP10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 E4f1Q8CCE9 783 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Slc52a2Q9D8F3 450 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Kank3Q9Z1P7 791 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 NinlQ6ZQ12 1394 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tarbp1E9Q368 1579 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Map7d1A2AJI0 846 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tbc1d1Q60949 1255 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Jade2Q6ZQF7 829 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Fbxo38Q8BMI0 1194 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 HgsQ99LI8 775 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Eif2ak3Q9Z2B5 1114 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Diaph2O70566 1098 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Exoc5Q3TPX4 708 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ag2Q3UPL5 249 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Stambpl1Q76N33 436 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Slc13a4Q8BZ82 625 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 PreplQ8C167 725 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Actn2Q9JI91 894 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 RpgrQ9R0X5 1001 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Pik3c2gO70167 1506 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Pax3P24610 479 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Psmc4P54775 418 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Eef1dP57776 281 aaKnown RBP10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 HmmrQ00547 794 aaKnown RBP10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ano8Q6PB70 1060 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Shtn1Q8K2Q9 631 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Psrc1Q9D0P7 329 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Add3Q9QYB5 706 aaKnown RBP10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Gm11983V9GXS8 105 aa10.47□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Hmx1O70218 332 aa10.46□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Rnaseh1O70338 285 aa10.46□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ino80bQ99PT3 375 aaKnown RBP10.46□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Ncapd2Q8K2Z4 1392 aa10.46□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Zmym3Q9JLM4 1370 aa10.46□□□□□ -0.73
Ctc1-201ENSMUST00000021278 Tecpr2Q3UH45 1423 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Hap1O35668 628 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Surf1P09925 306 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Mdh1P14152 334 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Idi1P58044 227 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gucy2fQ5SDA5 1108 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Foxd1Q61345 456 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ctnna3Q65CL1 895 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cypt2Q6P924 180 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Larp1Q6ZQ58 1072 aaKnown RBP10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Nek5Q7TSC3 627 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Uchl5Q9WUP7 329 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cntnap1O54991 1385 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Mroh1E0CZ22 1640 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Eif2ak4Q9QZ05 1648 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cfap99A0A140LIX9 648 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Cdk4P30285 303 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Pfkfb2P70265 519 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Hdhd2Q3UGR5 259 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Kctd16Q5DTY9 427 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Prpf4bQ61136 1007 aaKnown RBP10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Zbtb40Q6PCS8 1258 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Klhl30Q8C3F7 581 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Gramd4Q8CB44 633 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Dact1Q8R4A3 778 aa10.46□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Tmem131lQ3U3D7 1597 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Pdha1P35486 390 aaKnown RBP10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Zc3h18Q0P678 948 aaKnown RBP10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Eif3j1Q3UGC7 261 aaKnown RBP10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Eif3j2Q66JS6 263 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ptpdc1Q6NZK8 747 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Fsd2Q8BZ52 692 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Basp1Q91XV3 226 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Ppp6r3Q922D4 844 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 Usp16Q99LG0 825 aa10.45□□□□□ -0.74
Ctc1-201ENSMUST00000021278 ZwintQ9CQU5 252 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms