RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 Slc5a1Q8C3K6 665 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ssh3Q8K330 649 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Rrs1Q9CYH6 365 aaKnown RBP14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Speer4bQ9D9F7 267 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Pus3Q9JI38 481 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Gm21083A0A0G2JFD5 256 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Gm21149A0A0G2JFY7 255 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Mctp1E9PV86 951 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Speer4cG3UXD1 256 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Speer4eK7N6S8 255 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Gm17019K7N6W5 255 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Klra1P20937 262 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Klra4Q60651 263 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ccdc158Q8CDI6 1109 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Mis12Q9CY25 206 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Odf2lQ9D478 642 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Pard3Q99NH2 1333 aa14.24□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Cd151O35566 253 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ccdc129Q14B48 1034 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Atg9aQ68FE2 551 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Gnl3lQ6PGG6 577 aaKnown RBP14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Kcnf1Q7TSH7 493 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Golim4Q8BXA1 655 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Zfp317Q8C0Q5 607 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Spire2Q8K1S6 718 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Tmc2Q8R4P4 888 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ddx41Q91VN6 622 aaKnown RBP14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Bicd2Q921C5 820 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 AtrnQ9WU60 1428 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Trim30aP15533 496 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Nap1l2P51860 460 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Gucy2cQ3UWA6 1072 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Rasa4Q6PFQ7 802 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Serpina10Q8R121 448 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Pcdhgc5Q91XW9 944 aa14.23□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ttc30a2A2AKQ8 664 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 1700113H08RikE9Q9Q5 327 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Csrnp1P59054 583 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Timm10P62073 90 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Limch1Q3UH68 1057 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Thrap3Q569Z6 951 aaKnown RBP14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ttc30a1Q99J38 664 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ttc30bQ9CY00 664 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Txnrd1Q9JMH6 613 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Zeb2Q9R0G7 1215 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Col4a1P02463 1669 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Hmx1O70218 332 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Cyp2d10P24456 504 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 OatP29758 439 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Smarcc2Q6PDG5 1213 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Znf622Q91VY9 476 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Cwc25Q9DBF7 416 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Sh3bgrQ9WUZ7 214 aa14.22□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Nucb2P81117 420 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Phactr1Q2M3X8 580 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Zkscan4Q5SZT6 480 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 ZyxQ62523 564 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Cand2Q6ZQ73 1235 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Rab3gap1Q80UJ7 981 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Stard3nlQ9DCI3 235 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Zranb2Q9R020 330 aaKnown RBP14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Sos2Q02384 1333 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ank1Q02357 1862 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 FosbP13346 338 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Nxf2Q4ZGD8 691 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Rbm26Q6NZN0 1012 aaKnown RBP14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Fam102bQ8BQS4 339 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Chmp3Q9CQ10 224 aa14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Ctnnbl1Q9CWL8 563 aaKnown RBP14.21□□□□□ -0.13
Sdc4-201ENSMUST00000017153 Cfap58B2RW38 873 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Usp28Q5I043 1051 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Gm21985Q6P6P5 1106 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Lmbrd2Q8C561 694 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Ulbp1Q8HWA3 334 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Nop14Q8R3N1 860 aaKnown RBP14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Ccdc39Q9D5Y1 937 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Hmgn5Q9JL35 406 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Prl3d2F6R3P9 224 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 AK157302I3ITR1 129 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Sh3gl3Q62421 347 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Mrpl44Q9CY73 333 aaKnown RBP14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Isca1Q9D924 129 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Tbc1d8Q9Z1A9 1134 aa14.2□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Kansl3A2RSY1 903 aaKnown RBP14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Ifit1Q64282 463 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Npdc1Q64322 332 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Mtmr3Q8K296 1196 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Thoc1Q8R3N6 657 aaKnown RBP14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Krt25Q8VCW2 446 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Sgsm3Q8VCZ6 750 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 BrapQ99MP8 591 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Ltb4r2Q9JJL9 360 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Abca3Q8R420 1704 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Zfp142G5E869 1843 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Eya2O08575 532 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Kif1cO35071 1100 aaKnown RBP14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Myd88P22366 296 aa14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 CebpzP53569 1052 aaKnown RBP14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Exosc10P56960 887 aaKnown RBP14.19□□□□□ -0.14
Sdc4-201ENSMUST00000017153 Sycp1Q62209 993 aa14.19□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 102.7 ms