RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
VTI1A-208ENST00000494728 PSMA1P25786 263 aaKnown RBP8.97□□□□□ -0.97
VTI1A-208ENST00000494728 PJVKQ0ZLH3 352 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 TRAM1Q15629 374 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 MRGPRG-AS1Q2M3A8 158 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 CD200R1LQ6Q8B3 271 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 UNQ5815/PRO19632Q6UWF5 114 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 PPP1R27Q86WC6 154 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 ARPC1AQ92747 370 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 CNBD2Q96M20 576 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 CABLES2Q9BTV7 478 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 OR2D2Q9H210 308 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 ZNF230Q9UIE0 474 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-208ENST00000494728 ELF5Q9UKW6 265 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-208ENST00000494728 V9GY05 133 aa8.97□□□□□ -0.97
VTI1A-208ENST00000494728 LINC01619G3V211 115 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 M0R1X1 148 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 RAB27BO00194 218 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 BET1O15155 118 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 FABP7O15540 132 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 SAP30O75446 220 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 RBBP9O75884 186 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 LY86O95711 162 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 TFAP2AP05549 437 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 GSTT2P0CG29 244 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 GSTT2BP0CG30 244 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 SPNP16150 400 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 GNB3P16520 340 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 MC5RP33032 325 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 TPPP2P59282 170 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 DCTN2Q13561 401 aaKnown RBP8.96□□□□□ -0.98
VTI1A-208ENST00000494728 ACTBL2Q562R1 376 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 OR56B1Q8NGI3 324 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 GRPEL2Q8TAA5 225 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 ACOT13Q9NPJ3 140 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 NDUFB11Q9NX14 153 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 SDHAF2Q9NX18 166 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 U3KQK5 164 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 DNAH1Q9P2D7 4330 aa8.96□□□□□ -0.98
VTI1A-208ENST00000494728 A0A075B6Q4 140 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 SRRM4A7MD48 611 aaKnown RBP8.95□□□□□ -0.98
VTI1A-208ENST00000494728 RBMXL2O75526 392 aaKnown RBP8.95□□□□□ -0.98
VTI1A-208ENST00000494728 SPDEFO95238 335 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 CRYGBP07316 175 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 OR8U9P0C7N5 309 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 HIST1H1DP16402 221 aaKnown RBP8.95□□□□□ -0.98
VTI1A-208ENST00000494728 RPS16P62249 146 aaKnown RBP8.95□□□□□ -0.98
VTI1A-208ENST00000494728 AKIRIN2Q53H80 203 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 ZNF367Q7RTV3 350 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 TCTEX1D1Q8N7M0 179 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 OR4A4PQ8NGN8 299 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 RAB3CQ96E17 227 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 ZMAT5Q9UDW3 170 aaKnown RBP8.95□□□□□ -0.98
VTI1A-208ENST00000494728 ZNF221Q9UK13 617 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 MGAT4AQ9UM21 535 aa8.95□□□□□ -0.98
VTI1A-208ENST00000494728 TRBV6-7A0A0A0MS04 114 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 TRAV1-2A0A0B4J238 106 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 TRIM64CA6NLI5 447 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 IFITM5A6NNB3 132 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 LINC00473A8K010 186 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 APOA2P02652 100 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 APELAP0DMC3 54 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 INSL3P51460 131 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 FXYD3Q14802 87 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 C22orf42Q6IC83 251 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 ACSM6Q6P461 480 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 ZNF562Q6V9R5 426 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 OVCH2Q7RTZ1 564 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 ZNF429Q86V71 674 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-208ENST00000494728 OR10R2Q8NGX6 335 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 RHOVQ96L33 236 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 TSNAXQ99598 290 aaKnown RBP8.94□□□□□ -0.98
VTI1A-208ENST00000494728 RNF5Q99942 180 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 GHITMQ9H3K2 345 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 SLC35D1Q9NTN3 355 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 ADAM30Q9UKF2 790 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 RAB22AQ9UL26 194 aa8.94□□□□□ -0.98
VTI1A-208ENST00000494728 TRBV12-3P01733 135 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 TRGV3P03979 118 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 NHLRC4P0CG21 123 aaPredicted RBP8.93□□□□□ -0.98
VTI1A-208ENST00000494728 GP9P14770 177 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 PYHIN1Q6K0P9 492 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 SBSPONQ8IVN8 264 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 POC5Q8NA72 575 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 BVESQ8NE79 360 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 OR5T1Q8NG75 326 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 DDB2Q92466 427 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
VTI1A-208ENST00000494728 HARBI1Q96MB7 349 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.93□□□□□ -0.98
VTI1A-208ENST00000494728 SMAD5-AS1Q9Y6J3 95 aa8.93□□□□□ -0.98
VTI1A-208ENST00000494728 TRDV1A0A1B0GX56 115 aa8.92□□□□□ -0.98
VTI1A-208ENST00000494728 HSPB1P04792 205 aaKnown RBP8.92□□□□□ -0.98
VTI1A-208ENST00000494728 FRMD6-AS1P0C7T7 363 aa8.92□□□□□ -0.98
VTI1A-208ENST00000494728 RAB3BP20337 219 aa8.92□□□□□ -0.98
VTI1A-208ENST00000494728 RAB6AP20340 208 aa8.92□□□□□ -0.98
VTI1A-208ENST00000494728 TMEM267Q0VDI3 215 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-208ENST00000494728 TMEM177Q53S58 311 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms