RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 IGKV1-13P0DP09 117 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 NFYAP23511 347 aaPredicted RBP5.62□□□□□ -1.51
UBE4B-209ENST00000487244 DTYMKP23919 212 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 SOX6P35712 828 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 SERPINB10P48595 397 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 SCAND1P57086 179 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 GNG2P59768 71 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 NDPQ00604 133 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 C5orf64Q2M2E5 130 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 Q6ZS49 121 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 FOXRED2Q8IWF2 684 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 GVQW1Q8N7I0 195 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 SAMD12Q8N8I0 201 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 OR4X2Q8NGF9 303 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 OR8H1Q8NGG4 311 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 OR5AN1Q8NGI8 311 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 SLC25A46Q96AG3 418 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 R3HDM4Q96D70 268 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 RASL11BQ9BPW5 248 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 GINS4Q9BRT9 223 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 FBXL15Q9H469 300 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 SDHAF2Q9NX18 166 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 ZNF221Q9UK13 617 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 SPATA2Q9UM82 520 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 GAB2Q9UQC2 676 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 FBXO7Q9Y3I1 522 aa5.62□□□□□ -1.51
UBE4B-209ENST00000487244 IGHV7-81A0A0B4J1V7 117 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 OR5H14A6NHG9 310 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 DBX1A6NMT0 343 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 G3V318 75 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 G3V4G9 280 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 AP4M1O00189 453 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 FCN1O00602 326 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 SHOXO15266 292 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 ATP6V0E1O15342 81 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 SCGNO76038 276 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 DIRAS3O95661 229 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 TFAP2AP05549 437 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 EIF4EP06730 217 aaKnown RBP5.61□□□□□ -1.51
UBE4B-209ENST00000487244 RPL23AP62750 156 aaKnown RBP5.61□□□□□ -1.51
UBE4B-209ENST00000487244 DEFA6Q01524 100 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 CFHR3Q02985 330 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 ARL6IP1Q15041 203 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 CTF1Q16619 201 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 SRSF7Q16629 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
UBE4B-209ENST00000487244 PNLIPRP3Q17RR3 467 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 UBE2NLQ5JXB2 153 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 ETV3LQ6ZN32 361 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 NPBQ8NG41 125 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 CHPT1Q8WUD6 406 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 SNAPC3Q92966 411 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 PHF21AQ96BD5 680 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 DUX3Q96PT4 197 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 AUNIPQ9H7T9 357 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 PARP11Q9NR21 331 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 AP5S1Q9NUS5 200 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 ANXA10Q9UJ72 324 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 WASHC3Q9Y3C0 194 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 TSSC4Q9Y5U2 329 aaPredicted RBP5.61□□□□□ -1.51
UBE4B-209ENST00000487244 WSB1Q9Y6I7 421 aa5.61□□□□□ -1.51
UBE4B-209ENST00000487244 LINC00473A8K010 186 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 RRHO14718 337 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 SLC25A17O43808 307 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 GABARAPO95166 117 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 IGLV2-14P01704 120 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 IGLV2-23P01705 113 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 HLA-DRB1P01911 266 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 IGF1P05019 195 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 PF4V1P10720 104 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 EGR2P11161 476 aaPredicted RBP5.6□□□□□ -1.51
UBE4B-209ENST00000487244 MC5RP33032 325 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 ALDH3B2P48448 385 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 TAS2R20P59543 309 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 SSBP2P81877 361 aaPredicted RBP5.6□□□□□ -1.51
UBE4B-209ENST00000487244 PITPNAQ00169 270 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 PJVKQ0ZLH3 352 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 PSG5Q15238 335 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 DEFB136Q30KP8 78 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 GPR107Q5VW38 600 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 LIN54Q6MZP7 749 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 ANKRD13BQ86YJ7 626 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 CROCCP3Q8IVE0 287 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.6□□□□□ -1.51
UBE4B-209ENST00000487244 BEST4Q8NFU0 473 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 OR4F17Q8NGA8 305 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 CASTOR1Q8WTX7 329 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 DDB2Q92466 427 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 OR4F4Q96R69 305 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 CLCC1Q96S66 551 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 GPHA2Q96T91 129 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 MRPS26Q9BYN8 205 aaKnown RBP5.6□□□□□ -1.51
UBE4B-209ENST00000487244 DCSTAMPQ9H295 470 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 OR51J1Q9H342 316 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 GHITMQ9H3K2 345 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 SLC35D1Q9NTN3 355 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 COMMD3Q9UBI1 195 aa5.6□□□□□ -1.51
UBE4B-209ENST00000487244 RBM7Q9Y580 266 aaKnown RBP5.6□□□□□ -1.51
UBE4B-209ENST00000487244 A0A0A6YYH2 397 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 A6NJ64 397 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 SRRM4A7MD48 611 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms