RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 RNF5Q99942 180 aa13.01□□□□□ -0.33
DNMT1-221ENST00000589538 KIAA1456Q9P272 454 aa13.01□□□□□ -0.33
DNMT1-221ENST00000589538 RNF150Q9ULK6 438 aa13.01□□□□□ -0.33
DNMT1-221ENST00000589538 WASHC3Q9Y3C0 194 aa13.01□□□□□ -0.33
DNMT1-221ENST00000589538 PSMB11A5LHX3 300 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 H0YJW9 148 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 AP4M1O00189 453 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 APOA2P02652 100 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 SOX6P35712 828 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 ALDH3B2P48448 385 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 RORCP51449 518 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 F2RL1P55085 397 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 TAGLNQ01995 201 aaKnown RBP13□□□□□ -0.33
DNMT1-221ENST00000589538 H1FOOQ8IZA3 346 aaPredicted RBP13□□□□□ -0.33
DNMT1-221ENST00000589538 COMMD1Q8N668 190 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 SAMD12Q8N8I0 201 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 NPBQ8NG41 125 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 OR5AN1Q8NGI8 311 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 CITED2Q99967 270 aaPredicted RBP13□□□□□ -0.33
DNMT1-221ENST00000589538 OR2D2Q9H210 308 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 AUNIPQ9H7T9 357 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 ANXA10Q9UJ72 324 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 PKD1L1Q8TDX9 2849 aa13□□□□□ -0.33
DNMT1-221ENST00000589538 H7C2Y5 167 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 NBR2O15453 112 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 SSX5O60225 188 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 SLC22A5O76082 557 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 OR8U9P0C7N5 309 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 CD83Q01151 205 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 TMEM69Q5SWH9 247 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 GPR107Q5VW38 600 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 PDPNQ86YL7 162 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 OR8U1Q8NH10 309 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 AP3S1Q92572 193 aa12.99□□□□□ -0.33
DNMT1-221ENST00000589538 TSSC4Q9Y5U2 329 aaPredicted RBP12.99□□□□□ -0.33
DNMT1-221ENST00000589538 NBEAL1Q6ZS30 2694 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 IGKV1D-8A0A087WSZ0 117 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 M0R1X1 148 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 NDUFA3O95167 84 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 TSPAN15O95858 294 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 ARPC4P59998 168 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 CBX3Q13185 183 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 CTF1Q16619 201 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 NSUN5P1Q3KNT7 163 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 MZT2AQ6P582 158 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 HOGA1Q86XE5 327 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 STPG2Q8N412 459 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 BEST4Q8NFU0 473 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 OR4F17Q8NGA8 305 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 ADTRPQ96IZ2 230 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 OR4F4Q96R69 305 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 TSNAXQ99598 290 aaKnown RBP12.98□□□□□ -0.33
DNMT1-221ENST00000589538 ZNF580Q9UK33 172 aa12.98□□□□□ -0.33
DNMT1-221ENST00000589538 MGAM2Q2M2H8 2515 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 SMIM31A0A1B0GVY4 71 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 TCRBV4S1A1TA0A5B7 111 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 PROP1O75360 226 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 HLA-DRB1P01911 266 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 APOA1P02647 267 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 THBS3P49746 956 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 LUMP51884 338 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-221ENST00000589538 C5orf64Q2M2E5 130 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 GLDNQ6ZMI3 551 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-221ENST00000589538 FAM110DQ8TAY7 271 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-221ENST00000589538 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 COMMD3Q9UBI1 195 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-221ENST00000589538 OR2W1Q9Y3N9 320 aa12.97□□□□□ -0.33
DNMT1-221ENST00000589538 RRHO14718 337 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 SPDEFO95238 335 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 OR5H8P0DN80 308 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 RRASP10301 218 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 LIN54Q6MZP7 749 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 ZNF383Q8NA42 475 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 DRAXINQ8NBI3 349 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-221ENST00000589538 FLYWCH2Q96CP2 140 aaKnown RBP12.96□□□□□ -0.33
DNMT1-221ENST00000589538 NOL4LQ96MY1 436 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-221ENST00000589538 BCL7BQ9BQE9 202 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 NAA50Q9GZZ1 169 aaKnown RBP12.96□□□□□ -0.33
DNMT1-221ENST00000589538 IFT46Q9NQC8 304 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 SLC35D1Q9NTN3 355 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 NECAP2Q9NVZ3 263 aa12.96□□□□□ -0.33
DNMT1-221ENST00000589538 TRRAPQ9Y4A5 3859 aa12.96□□□□□ -0.34
DNMT1-221ENST00000589538 HLA-DQB1P01920 261 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 IGF1P05019 195 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 ZNF182P17025 639 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-221ENST00000589538 VDAC1P21796 283 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 CNTFRP26992 372 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 TAS2R20P59543 309 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 RPS16P62249 146 aaKnown RBP12.95□□□□□ -0.34
DNMT1-221ENST00000589538 PLGLAQ15195 96 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 RTL8BQ17RB0 113 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 TEX38Q6PEX7 206 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 ZNF645Q8N7E2 425 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 R3HDM4Q96D70 268 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 RITA1Q96K30 269 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 HSPB9Q9BQS6 159 aa12.95□□□□□ -0.34
DNMT1-221ENST00000589538 ZFP57Q9NU63 452 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms