RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 FOXRED2Q8IWF2 684 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 STPG2Q8N412 459 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 OR10R2Q8NGX6 335 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 RAB3CQ96E17 227 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 HSPB9Q9BQS6 159 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 ZNF251Q9BRH9 671 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 AGMATQ9BSE5 352 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 LINC00527Q9UJ94 153 aa8.64□□□□□ -1.03
SPG11-216ENST00000559347 IGKV1-6A0A0C4DH72 117 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 LINC01548A6NM66 108 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 NOTOA8MTQ0 251 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 AP4M1O00189 453 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 RAB27BO00194 218 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 RAB29O14966 203 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 FCGR3AP08637 254 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 SCTP09683 121 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 PF4V1P10720 104 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 HIST1H1DP16402 221 aaKnown RBP8.63□□□□□ -1.03
SPG11-216ENST00000559347 ZBTB25P24278 435 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 GADD45AP24522 165 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 ACTBP60709 375 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 MMDQ15546 238 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 NEDD8Q15843 81 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 BEAN1Q3B7T3 259 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 RPL39P5Q59GN2 51 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 ZNF329Q86UD4 541 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 EDARADDQ8WWZ3 215 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 PTX4Q96A99 478 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 RASL11BQ9BPW5 248 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 CABLES2Q9BTV7 478 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 OR51E2Q9H255 320 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 PIPOXQ9P0Z9 390 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 SSR3Q9UNL2 185 aa8.63□□□□□ -1.03
SPG11-216ENST00000559347 TRDCB7Z8K6 153 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 HSPA12AO43301 675 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 CD3GP09693 182 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 GNB3P16520 340 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 CNTFRP26992 372 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 SOX6P35712 828 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 SLC35B1P78383 322 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 MRPS15P82914 257 aaKnown RBP8.62□□□□□ -1.03
SPG11-216ENST00000559347 KPRPQ5T749 579 aaPredicted RBP8.62□□□□□ -1.03
SPG11-216ENST00000559347 SFXN4Q6P4A7 337 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 TPRA1Q86W33 373 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 ABHD14BQ96IU4 210 aa8.62□□□□□ -1.03
SPG11-216ENST00000559347 C11orf54Q9H0W9 315 aaPredicted RBP8.62□□□□□ -1.03
SPG11-216ENST00000559347 A0A075B6Q4 140 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 METTL21EPA6NDL7 271 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 OR5H14A6NHG9 310 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 NBR2O15453 112 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 FABP7O15540 132 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 RRP9O43818 475 aaKnown RBP8.61□□□□□ -1.03
SPG11-216ENST00000559347 NDUFA3O95167 84 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 HLA-DRB1P01911 266 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 PF4P02776 101 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 CT45A6P0DMU7 189 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 CT45A5P0DMU8 189 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 CT45A7P0DMV0 189 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 CEACAM6P40199 344 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 RPL23AP62750 156 aaKnown RBP8.61□□□□□ -1.03
SPG11-216ENST00000559347 CFHR3Q02985 330 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 KIR2DS1Q14954 304 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 GLDNQ6ZMI3 551 aaPredicted RBP8.61□□□□□ -1.03
SPG11-216ENST00000559347 ETV3LQ6ZN32 361 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 COMMD1Q8N668 190 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 OR4A4PQ8NGN8 299 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 LGALS14Q8TCE9 139 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 MAFIPQ8WZ33 124 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 RITA1Q96K30 269 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 KCTD7Q96MP8 289 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 CHCHD6Q9BRQ6 235 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 TOLLIPQ9H0E2 274 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 GHITMQ9H3K2 345 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 RNF167Q9H6Y7 350 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.61□□□□□ -1.03
SPG11-216ENST00000559347 RDH8Q9NYR8 311 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 ZNF107Q9UII5 783 aaPredicted RBP8.61□□□□□ -1.03
SPG11-216ENST00000559347 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
SPG11-216ENST00000559347 H0YJW9 148 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 PROP1O75360 226 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 DIRAS3O95661 229 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 IGF1P05019 195 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 SNRPBP14678 240 aaKnown RBP8.6□□□□□ -1.03
SPG11-216ENST00000559347 CD36P16671 472 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 CD33P20138 364 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 SDC2P34741 201 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 SERPINB10P48595 397 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 IGSF11Q5DX21 431 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 NPBQ8NG41 125 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 PHF21AQ96BD5 680 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 ATG5Q9H1Y0 275 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 ZNF230Q9UIE0 474 aaPredicted RBP8.6□□□□□ -1.03
SPG11-216ENST00000559347 DAPK2Q9UIK4 370 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 ELF5Q9UKW6 265 aaPredicted RBP8.6□□□□□ -1.03
SPG11-216ENST00000559347 NOTCH3Q9UM47 2321 aa8.6□□□□□ -1.03
SPG11-216ENST00000559347 IGKV1D-8A0A087WSZ0 117 aa8.59□□□□□ -1.03
SPG11-216ENST00000559347 TRBV6-7A0A0A0MS04 114 aa8.59□□□□□ -1.03
SPG11-216ENST00000559347 LOC100506127A0A0U1RQW1 187 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms