RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PUS1Q9Y606 427 aaKnown RBP eCLIP0.31□□□□□ -2.36
RNU6-541P-201ENST00000384709 ALG5Q9Y673 324 aa0.31□□□□□ -2.36
RNU6-541P-201ENST00000384709 MCM3APO60318 1980 aa0.31□□□□□ -2.36
RNU6-541P-201ENST00000384709 CLUHO75153 1309 aa0.31□□□□□ -2.36
RNU6-541P-201ENST00000384709 COL4A5P29400 1685 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 SCN10AQ9Y5Y9 1956 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 GRIN2BQ13224 1484 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 SCN3AQ9NY46 2000 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 USP24Q9UPU5 2620 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 OR5K4A6NMS3 321 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 B4DEV8 164 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 F8W036 122 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 K7EQS6 105 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 UGT2B11O75310 529 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 CD7P09564 240 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 PSMA1P25786 263 aaKnown RBP0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 ATP6V0CP27449 155 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 XCL1P47992 114 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 PSMB3P49720 205 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 OR10A3P58181 314 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 GABARAPL2P60520 117 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 FAM3AP98173 230 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 PSG3Q16557 428 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 C6orf183Q5T699 404 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 OR51H1Q8NH63 302 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 UGT2B28Q9BY64 529 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 RAB1BQ9H0U4 201 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 XKR8Q9H6D3 395 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 TMEM216Q9P0N5 145 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 NXT1Q9UKK6 140 aaKnown RBP0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 SNX24Q9Y343 169 aa0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 BZW2Q9Y6E2 419 aaKnown RBP0.3□□□□□ -2.36
RNU6-541P-201ENST00000384709 SNRNP200O75643 2136 aaKnown RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 TMSB15BA0A087X1C1 80 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 A0A1B0GVG6 124 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 LINC00862A6NCI5 91 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 GPR171O14626 319 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 PHYHO14832 338 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 MRPS14O60783 128 aaKnown RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 CST4P01036 141 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 ATF1P18846 271 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 PTNP21246 168 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 GADD45AP24522 165 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 HINT1P49773 126 aaPredicted RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 RPL14P50914 215 aaKnown RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 RAP1GDS1P52306 607 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 LINC00313P59037 77 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 GTF2BQ00403 316 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 MAPK14Q16539 360 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 ZNF791Q3KP31 576 aaPredicted RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 TRMT12Q53H54 448 aaKnown RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 LHFPL1Q86WI0 220 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 ST13P4Q8IZP2 240 aaPredicted RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 CLDND2Q8NHS1 167 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 RORBQ92753 470 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 MRAP2Q96G30 205 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 MGLLQ99685 303 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 CHST5Q9GZS9 411 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 OR51B6Q9H340 312 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 LINC00527Q9UJ94 153 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 SNX12Q9UMY4 172 aa0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 KLK5Q9Y337 293 aaPredicted RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 SOX21Q9Y651 276 aaPredicted RBP0.29□□□□□ -2.36
RNU6-541P-201ENST00000384709 IGKV2-40A0A087WW87 121 aaPredicted RBP0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 TRGV5A0A0B4J1U4 118 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 TRAV41A0A0B4J266 112 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 IGKV3D-7A0A0C4DH55 119 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 IGKV3OR2-268A0A0C4DH90 116 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 GOLGA8IPA6NC78 632 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 NDUFB2O95178 105 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 CSTAP01040 98 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 IGKV2D-40P01614 121 aaPredicted RBP0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 PRB4P10163 310 aaPredicted RBP0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 CRYBB3P26998 211 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 OR1E2P47887 323 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 DEFA6Q01524 100 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 OR10K2Q6IF99 312 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 PLCZ1Q86YW0 608 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 TMEM75Q8N9X5 138 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 MED18Q9BUE0 208 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 NKX6-2Q9C056 277 aaPredicted RBP0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 HAUS4Q9H6D7 363 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 METTL17Q9H7H0 456 aaPredicted RBP0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 IFT46Q9NQC8 304 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 DMAC2Q9NW81 257 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 ANGPT4Q9Y264 503 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 ABCB11O95342 1321 aa0.28□□□□□ -2.36
RNU6-541P-201ENST00000384709 CASP8AP2Q9UKL3 1982 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 MEIKINA0A087WXM9 373 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 OR11H12B2RN74 326 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 SGCEO43556 437 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 CYTH3O43739 400 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 CRYBA1P05813 215 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 CCNOP22674 350 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 KCNJ3P48549 501 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 ERHP84090 104 aaKnown RBP0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 CENPWQ5EE01 88 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 CNEP1R1Q8N9A8 125 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 OR11H2Q8NH07 326 aa0.27□□□□□ -2.37
RNU6-541P-201ENST00000384709 OR5J2Q8NH18 312 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms