RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TSPAN15O95858 294 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 MOSP00540 346 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 IGHV3-7P01780 117 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 HSMCR30P0CW71 290 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 TMEM11P17152 192 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 BLVRBP30043 206 aaPredicted RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 SLC6A1P30531 599 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 FGF9P31371 208 aaPredicted RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 RPS25P62851 125 aaKnown RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 FABP5Q01469 135 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 DEFA6Q01524 100 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 HMGN3Q15651 99 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 SSX1Q16384 188 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 C2orf76Q3KRA6 126 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 PDLIM3Q53GG5 364 aaPredicted RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 FBLN7Q53RD9 439 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 UBE2UQ5VVX9 321 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 FAM71F2Q6NXP2 309 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 MOB1BQ7L9L4 216 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 COMMD1Q8N668 190 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 OR56B4Q8NH76 319 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 OR1L1Q8NH94 360 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 FAM110DQ8TAY7 271 aaPredicted RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 TMEM203Q969S6 136 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 FAM3DQ96BQ1 224 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 CNBD2Q96M20 576 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 CITED2Q99967 270 aaPredicted RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 SULT4A1Q9BR01 284 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 FAAP24Q9BTP7 215 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 CENPOQ9BU64 300 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 CCDC90BQ9GZT6 254 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 ABCG5Q9H222 651 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 OR2S2Q9NQN1 319 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 ZFP57Q9NU63 452 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 LIN7CQ9NUP9 197 aaKnown RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 PLEKHJ1Q9NW61 149 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 NDUFB11Q9NX14 153 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 GNG12Q9UBI6 72 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 RAB22AQ9UL26 194 aa5.55□□□□□ -1.52
VPS50-218ENST00000485994 PRKDCP78527 4128 aaKnown RBP5.55□□□□□ -1.52
VPS50-218ENST00000485994 TNCP24821 2201 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 IGHV3-43A0A0B4J1X8 118 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 A0A1W2PPE3 182 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 SLC31A2O15432 143 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 SOCS1O15524 211 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 KCNAB3O43448 404 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 DIRAS3O95661 229 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 IGKV1D-33P01593 117 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 IGKV1-33P01594 117 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 IGHV3-43DP0DP04 118 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 RAB6AP20340 208 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 CALRP27797 417 aaKnown RBP5.54□□□□□ -1.52
VPS50-218ENST00000485994 MAP2K4P45985 399 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 GNG10P50151 68 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 HES1Q14469 280 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 P2RY14Q15391 338 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 RAB11BQ15907 218 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 SRSF7Q16629 238 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS50-218ENST00000485994 LTC4SQ16873 150 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 TCTEX1D4Q5JR98 221 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 OR10K2Q6IF99 312 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 C6orf201Q7Z4U5 140 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 MOB3BQ86TA1 216 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 ODF3L1Q8IXM7 274 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 SPARTQ8N0X7 666 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 FAM71E2Q8N5Q1 922 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 Q8N9W7 124 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 OR51D1Q8NGF3 324 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 OR56B1Q8NGI3 324 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 FCGR1BQ92637 280 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 FAM46BQ96A09 425 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 RNF5Q99942 180 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 AGMATQ9BSE5 352 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 NICN1Q9BSH3 213 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 GON7Q9BXV9 100 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 Q9H521 79 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 PLGRKTQ9HBL7 147 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 ABRACLQ9P1F3 81 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 STEAP1Q9UHE8 339 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 GAB2Q9UQC2 676 aa5.54□□□□□ -1.52
VPS50-218ENST00000485994 AK6Q9Y3D8 172 aaKnown RBP5.54□□□□□ -1.52
VPS50-218ENST00000485994 A0A0A6YYD4 124 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 TCRBV4S1A1TA0A5B7 111 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 PSMB11A5LHX3 300 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 IFITM5A6NNB3 132 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 AP4M1O00189 453 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 RAB29O14966 203 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 DUS4LO95620 317 aaKnown RBP5.53□□□□□ -1.52
VPS50-218ENST00000485994 IGF1P05019 195 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 SLC35B1P78383 322 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 ARL6IP1Q15041 203 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 BEAN1Q3B7T3 259 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 FAM53AQ6NSI3 398 aaPredicted RBP5.53□□□□□ -1.52
VPS50-218ENST00000485994 Q6ZPA2 131 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 Q6ZS49 121 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 ZNF833PQ6ZTB9 187 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 SLC35E3Q7Z769 313 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 TPRA1Q86W33 373 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 RNF152Q8N8N0 203 aa5.53□□□□□ -1.52
VPS50-218ENST00000485994 C11orf44Q8N8P7 122 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms