RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 RPUSD1Q9UJJ7 312 aaKnown RBP1.81□□□□□ -2.12
VPS8-220ENST00000469713 PHLDA3Q9Y5J5 127 aa1.81□□□□□ -2.12
VPS8-220ENST00000469713 URGCP-MRPS24S4R325 110 aa1.81□□□□□ -2.12
VPS8-220ENST00000469713 ERICH4A6NGS2 130 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 SULT1C2O00338 296 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 EEF1E1O43324 174 aaKnown RBP1.8□□□□□ -2.12
VPS8-220ENST00000469713 NEMFO60524 1076 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 SOX14O95416 240 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 PSKH1P11801 424 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 NQO2P16083 231 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 SYT1P21579 422 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 CASQ1P31415 396 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 C1QTNF8P60827 252 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 HES3Q5TGS1 186 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 NOXRED1Q6NXP6 359 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 TCF23Q7RTU1 214 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 OTUD6BQ8N6M0 293 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 OR10D4PQ8NGN7 298 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 SPPL2BQ8TCT7 592 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 RORBQ92753 470 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 HIST1H2BAQ96A08 127 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 ALX4Q9H161 411 aaPredicted RBP1.8□□□□□ -2.12
VPS8-220ENST00000469713 LINC00588Q9Y4M8 146 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 ARAP3Q8WWN8 1544 aa1.8□□□□□ -2.12
VPS8-220ENST00000469713 ZNF878C9JN71 531 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 M0QX08 132 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 ZNF73O43830 326 aaPredicted RBP1.79□□□□□ -2.12
VPS8-220ENST00000469713 OR12D1P0DN82 309 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 UGT2B10P36537 528 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 INPP1P49441 399 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 APOFQ13790 326 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 CST6Q15828 149 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 USF2Q15853 346 aaPredicted RBP1.79□□□□□ -2.12
VPS8-220ENST00000469713 PYCR3Q53H96 274 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 NIPAL1Q6NVV3 410 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 SCXQ7RTU7 201 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 NIT1Q86X76 327 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 MRPL16Q9NX20 251 aaKnown RBP1.79□□□□□ -2.12
VPS8-220ENST00000469713 BRD4O60885 1362 aaPredicted RBP1.79□□□□□ -2.12
VPS8-220ENST00000469713 MYO15BQ96JP2 1530 aa1.79□□□□□ -2.12
VPS8-220ENST00000469713 LTBP2Q14767 1821 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 RAB3GAP2Q9H2M9 1393 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 GPR171O14626 319 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 LTAP01374 205 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 LIMS3P0CW19 117 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 LIMS4P0CW20 117 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 ATF1P18846 271 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 FUSP35637 526 aaKnown RBP eCLIP1.78□□□□□ -2.12
VPS8-220ENST00000469713 COILP38432 576 aaPredicted RBP1.78□□□□□ -2.12
VPS8-220ENST00000469713 XRCC4Q13426 336 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 TMEM249Q2WGJ8 235 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 SELENOHQ8IZQ5 122 aaKnown RBP1.78□□□□□ -2.12
VPS8-220ENST00000469713 MUC15Q8N387 334 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 OR9I1Q8NGQ6 314 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 OR11L1Q8NGX0 322 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 DTD1Q8TEA8 209 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 GTF2H4Q92759 462 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 FAM210AQ96ND0 272 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 DMAC2Q9NW81 257 aa1.78□□□□□ -2.12
VPS8-220ENST00000469713 DOCK6Q96HP0 2047 aa1.78□□□□□ -2.13
VPS8-220ENST00000469713 KIAA0232Q92628 1395 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 USP42Q9H9J4 1324 aaKnown RBP1.77□□□□□ -2.13
VPS8-220ENST00000469713 IGHV3OR15-7A0A075B7D8 119 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 IGKV1-12A0A0C4DH73 117 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 LINC00854A0A1B0GVQ3 168 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 EFCAB9A8MZ26 197 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 G3V3Q6 166 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 J3QLI3 93 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 SLC25A20O43772 301 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 IGKV1D-12P01611 117 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 SPAM1P38567 509 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 ACTR1BP42025 376 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 SKP2Q13309 424 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 SYCP1Q15431 976 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 TCF24Q7RTU0 167 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 SYCE1Q8N0S2 351 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 C17orf78Q8N4C9 275 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 MFSD8Q8NHS3 518 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 RNASEH2CQ8TDP1 164 aaKnown RBP1.77□□□□□ -2.13
VPS8-220ENST00000469713 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 HBEGFQ99075 208 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 ACBD6Q9BR61 282 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 ZNF286AQ9HBT8 521 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 FBXL3Q9UKT7 428 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 OR51B4Q9Y5P0 310 aa1.77□□□□□ -2.13
VPS8-220ENST00000469713 PCNX2A6NKB5 2137 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 PIK3R4Q99570 1358 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 KLRC4-KLRK1H3BQV0 150 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 MPZL2O60487 215 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 CDK14O94921 469 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 CBR1P16152 277 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 CRABP1P29762 137 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 GABRA3P34903 492 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 RCVRNP35243 200 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 CD151P48509 253 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 PSMD7P51665 324 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 DEFA6Q01524 100 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 TSPAN31Q12999 210 aa1.76□□□□□ -2.13
VPS8-220ENST00000469713 PAFAH1B3Q15102 231 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms