RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ELOA3CA0A087WX78 387 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TRAV1-2A0A0B4J238 106 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OOEPA6NGQ2 149 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 C19orf84I3L1E1 186 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SIAH2O43255 324 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ARG1P05089 322 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GYPBP06028 91 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 HLA-GP17693 338 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GABRB1P18505 474 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 LOXP28300 417 aaPredicted RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CALCRP30988 508 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CD80P33681 288 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 RIPPLY3P57055 190 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 BTG1P62324 171 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 FAM3AP98173 230 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PSG7Q13046 419 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 NEDD8Q15843 81 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 RTN4RL2Q86UN3 420 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PUSL1Q8N0Z8 303 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 POC1AQ8NBT0 407 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR5P3Q8WZ94 311 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 GGHQ92820 318 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SNX22Q96L94 193 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF75AQ96N20 296 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 OR2V2Q96R30 315 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 TPPP3Q9BW30 176 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 KRTAP9-2Q9BYQ4 174 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 BARHL1Q9BZE3 327 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 MED20Q9H944 212 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PATZ1Q9HBE1 687 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 ABRACLQ9P1F3 81 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 CLN8Q9UBY8 286 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 UBQLN2Q9UHD9 624 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SMPXQ9UHP9 88 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 MRM2Q9UI43 246 aaKnown RBP3.04□□□□□ -1.92
PTPN22-211ENST00000538253 SCP2D1Q9UJQ7 156 aa3.04□□□□□ -1.92
PTPN22-211ENST00000538253 PTPN13Q12923 2485 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 TRDV1A0A1B0GX56 115 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 OOSP1A8MZH6 123 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 C1orf196B1AJZ1 125 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF732B4DXR9 585 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 E9PQ18 207 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 M0R1W7 72 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 LANCL1O43813 399 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 CD5LO43866 347 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 RBMXL2O75526 392 aaKnown RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 IFNA7P01567 189 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 IGHV1-46P01743 117 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 CD5P06127 495 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 TMEM225BP0DP42 221 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 GTF2F2P13984 249 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 PSMB9P28065 219 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 OR12D2P58182 307 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 ERVFRD-1P60508 538 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 RAB5BP61020 215 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 RPL15P61313 204 aaKnown RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 GNB2P62879 340 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 SURF2Q15527 256 aaPredicted RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 RAB11BQ15907 218 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 SCGB2B2Q4G0G5 96 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 TP53I3Q53FA7 332 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 TMEM42Q69YG0 159 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 PLXDC2Q6UX71 529 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 KCTD9Q7L273 389 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 BEND2Q8NDZ0 799 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 OR56B1Q8NGI3 324 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 OR14K1Q8NGZ2 314 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 OR51E1Q8TCB6 317 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 PTX4Q96A99 478 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 PERPQ96FX8 193 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 AKR1E2Q96JD6 320 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 MGLLQ99685 303 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 NDUFAF3Q9BU61 184 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 SNHG12Q9BXW3 62 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 TLNRD1Q9H1K6 362 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 ELL3Q9HB65 397 aaPredicted RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 PNRC2Q9NPJ4 139 aaKnown RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 C1orf123Q9NWV4 160 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 SF3B6Q9Y3B4 125 aaKnown RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 KPTNQ9Y664 436 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 USP24Q9UPU5 2620 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 A0A1W2PPV4 95 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 A0A1W2PR80 420 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 OR4C45A6NMZ5 311 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 MGST3O14880 152 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 NCR1O76036 304 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 IFNA21P01568 189 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 UCHL1P09936 223 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 KLK2P20151 261 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 CRHBPP24387 322 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 AZGP1P25311 298 aaKnown RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 CAV3P56539 151 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 DEFA1P59665 94 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 DEFA3P59666 94 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 ARF6P62330 175 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 SLC35A2P78381 396 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 MRPS10P82664 201 aaKnown RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 DEFA5Q01523 94 aa3.03□□□□□ -1.92
PTPN22-211ENST00000538253 HNRNPA0Q13151 305 aaKnown RBP3.03□□□□□ -1.92
PTPN22-211ENST00000538253 SLC22A6Q4U2R8 563 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms