RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR56, Length 88 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR56	snR56	HUL5	P53119	910 aa		4.29	□□□□□ -1.72
snR56	snR56	NGL2	Q03264	515 aa	Known RBP	4.29	□□□□□ -1.72
snR56	snR56	ORM2	Q06144	216 aa		4.29	□□□□□ -1.72
snR56	snR56	LEU2	P04173	364 aa	Predicted RBP	4.28	□□□□□ -1.72
snR56	snR56	VBA3	P25594	458 aa		4.28	□□□□□ -1.72
snR56	snR56	STO1	P34160	861 aa	Known RBP	4.28	□□□□□ -1.72
snR56	snR56	CAF16	P43569	289 aa		4.28	□□□□□ -1.72
snR56	snR56	TAF7	Q05021	590 aa		4.28	□□□□□ -1.72
snR56	snR56	GAL11	P19659	1081 aa		4.27	□□□□□ -1.73
snR56	snR56	YIL077C	P40508	320 aa		4.27	□□□□□ -1.73
snR56	snR56	SET2	P46995	733 aa	Known RBP	4.27	□□□□□ -1.73
snR56	snR56	MAL11	P53048	616 aa		4.27	□□□□□ -1.73
snR56	snR56	CPR8	P53728	308 aa		4.27	□□□□□ -1.73
snR56	snR56	UFO1	Q04511	668 aa		4.27	□□□□□ -1.73
snR56	snR56	BEM3	P32873	1128 aa		4.26	□□□□□ -1.73
snR56	snR56	APN2	P38207	520 aa		4.26	□□□□□ -1.73
snR56	snR56	HSL7	P38274	827 aa		4.26	□□□□□ -1.73
snR56	snR56	NTH1	P32356	751 aa		4.25	□□□□□ -1.73
snR56	snR56	YJL049W	P47048	450 aa		4.25	□□□□□ -1.73
snR56	snR56	BRE5	P53741	515 aa	Known RBP	4.25	□□□□□ -1.73
snR56	snR56	YFT2	Q06676	274 aa		4.25	□□□□□ -1.73
snR56	snR56	VPS36	Q06696	566 aa		4.25	□□□□□ -1.73
snR56	snR56	POM34	Q12445	299 aa		4.25	□□□□□ -1.73
snR56	snR56	YPT7	P32939	208 aa		4.24	□□□□□ -1.73
snR56	snR56	IRC3	Q06683	689 aa		4.24	□□□□□ -1.73
snR56	snR56	IZH3	Q07959	543 aa		4.24	□□□□□ -1.73
snR56	snR56	CDC9	P04819	755 aa		4.23	□□□□□ -1.73
snR56	snR56	TUP1	P16649	713 aa		4.23	□□□□□ -1.73
snR56	snR56	EUG1	P32474	517 aa		4.23	□□□□□ -1.73
snR56	snR56	COS111	P38308	924 aa		4.23	□□□□□ -1.73
snR56	snR56	NMD5	P46970	1048 aa		4.23	□□□□□ -1.73
snR56	snR56	ATP23	P53722	227 aa		4.23	□□□□□ -1.73
snR56	snR56	NHX1	Q04121	633 aa		4.23	□□□□□ -1.73
snR56	snR56	PMA2	P19657	947 aa		4.22	□□□□□ -1.73
snR56	snR56	ELF1	P36053	145 aa		4.22	□□□□□ -1.73
snR56	snR56	ERG20	P08524	352 aa	Known RBP	4.21	□□□□□ -1.74
snR56	snR56	AKL1	P38080	1108 aa	Known RBP	4.21	□□□□□ -1.74
snR56	snR56	PRS5	Q12265	496 aa	Known RBP	4.21	□□□□□ -1.74
snR56	snR56	PXL1	P36166	706 aa		4.2	□□□□□ -1.74
snR56	snR56	SSZ1	P38788	538 aa	Known RBP	4.2	□□□□□ -1.74
snR56	snR56	SCW4	P53334	386 aa	Known RBP	4.2	□□□□□ -1.74
snR56	snR56	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
snR56	snR56	ISA1	Q07821	250 aa	Predicted RBP	4.2	□□□□□ -1.74
snR56	snR56	MDM12	Q92328	271 aa		4.2	□□□□□ -1.74
snR56	snR56	HOG1	P32485	435 aa		4.19	□□□□□ -1.74
snR56	snR56	PCI8	P40512	444 aa		4.19	□□□□□ -1.74
snR56	snR56	BIT61	P47041	543 aa		4.19	□□□□□ -1.74
snR56	snR56	DAK1	P54838	584 aa	Known RBP	4.19	□□□□□ -1.74
snR56	snR56	RSC9	Q03124	581 aa		4.19	□□□□□ -1.74
snR56	snR56	NEW1	Q08972	1196 aa	Known RBP	4.19	□□□□□ -1.74
snR56	snR56	ASK1	P35734	292 aa		4.18	□□□□□ -1.74
snR56	snR56	MNN4	P36044	1178 aa		4.18	□□□□□ -1.74
snR56	snR56	SPC97	P38863	823 aa		4.18	□□□□□ -1.74
snR56	snR56	ERG13	P54839	491 aa	Known RBP	4.18	□□□□□ -1.74
snR56	snR56	TRS23	Q03784	219 aa		4.18	□□□□□ -1.74
snR56	snR56	RPL7A	P05737	244 aa	Known RBP	4.17	□□□□□ -1.74
snR56	snR56	CIT2	P08679	460 aa		4.17	□□□□□ -1.74
snR56	snR56	YJR039W	P47107	1121 aa		4.17	□□□□□ -1.74
snR56	snR56	RPL7B	Q12213	244 aa	Known RBP	4.17	□□□□□ -1.74
snR56	snR56	AQY1	P0CD91	305 aa		4.16	□□□□□ -1.74
snR56	snR56	SEC15	P22224	910 aa		4.16	□□□□□ -1.74
snR56	snR56	KIN82	P25341	720 aa		4.16	□□□□□ -1.74
snR56	snR56	YHR202W	P38887	602 aa		4.16	□□□□□ -1.74
snR56	snR56	CCT4	P39078	528 aa	Known RBP	4.16	□□□□□ -1.74
snR56	snR56	MNT3	P40549	630 aa		4.16	□□□□□ -1.74
snR56	snR56	SNO3	P43544	222 aa		4.16	□□□□□ -1.74
snR56	snR56	ERR1	P0CX10	437 aa		4.15	□□□□□ -1.75
snR56	snR56	ERR2	P0CX11	437 aa		4.15	□□□□□ -1.75
snR56	snR56	MRPL9	P31334	269 aa		4.15	□□□□□ -1.75
snR56	snR56	RIM4	P38741	713 aa		4.15	□□□□□ -1.75
snR56	snR56	ZPS1	Q12512	249 aa		4.15	□□□□□ -1.75
snR56	snR56	CPA2	P03965	1118 aa	Known RBP	4.14	□□□□□ -1.75
snR56	snR56	HEM1	P09950	548 aa	Predicted RBP	4.14	□□□□□ -1.75
snR56	snR56	FRS1	P15624	595 aa	Known RBP	4.14	□□□□□ -1.75
snR56	snR56	TSR4	P25040	408 aa		4.14	□□□□□ -1.75
snR56	snR56	THI6	P41835	540 aa		4.14	□□□□□ -1.75
snR56	snR56	BST1	P43571	1029 aa		4.14	□□□□□ -1.75
snR56	snR56	LSC1	P53598	329 aa	Known RBP	4.14	□□□□□ -1.75
snR56	snR56	DCS2	Q12123	353 aa		4.14	□□□□□ -1.75
snR56	snR56	SRD1	P09007	221 aa		4.13	□□□□□ -1.75
snR56	snR56	PET127	P32606	800 aa		4.13	□□□□□ -1.75
snR56	snR56	RPC34	P32910	317 aa		4.13	□□□□□ -1.75
snR56	snR56	PIH1	P38768	344 aa		4.13	□□□□□ -1.75
snR56	snR56	JHD1	P40034	492 aa		4.13	□□□□□ -1.75
snR56	snR56	MAF1	P41910	395 aa		4.13	□□□□□ -1.75
snR56	snR56	ATG36	P46983	293 aa		4.13	□□□□□ -1.75
snR56	snR56	VHS3	Q08438	674 aa		4.13	□□□□□ -1.75
snR56	snR56	RPS9B	P05755	195 aa	Known RBP	4.12	□□□□□ -1.75
snR56	snR56	GSY1	P23337	708 aa		4.12	□□□□□ -1.75
snR56	snR56	MEF1	P25039	761 aa		4.12	□□□□□ -1.75
snR56	snR56	APD1	P38281	316 aa		4.12	□□□□□ -1.75
snR56	snR56	NUG1	P40010	520 aa	Known RBP	4.12	□□□□□ -1.75
snR56	snR56	GCS1	P35197	352 aa		4.11	□□□□□ -1.75
snR56	snR56	CHZ1	P40019	153 aa	Predicted RBP	4.11	□□□□□ -1.75
snR56	snR56	YNL018C	P53976	612 aa		4.11	□□□□□ -1.75
snR56	snR56	IDP3	P53982	420 aa	Known RBP	4.11	□□□□□ -1.75
snR56	snR56	GPD1	Q00055	391 aa	Known RBP	4.11	□□□□□ -1.75
snR56	snR56	RCR2	Q03446	210 aa	Known RBP	4.11	□□□□□ -1.75
snR56	snR56	BEM4	P39011	633 aa		4.1	□□□□□ -1.75
snR56	snR56	DOT6	P40059	670 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms