RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W RSC8P43609 557 aaKnown RBP2.66□□□□□ -1.98
YOP1YPR028W ATG36P46983 293 aa2.66□□□□□ -1.98
YOP1YPR028W MPS3P47069 682 aa2.66□□□□□ -1.98
YOP1YPR028W RTA1P53047 317 aa2.66□□□□□ -1.98
YOP1YPR028W NGL2Q03264 515 aaKnown RBP2.66□□□□□ -1.98
YOP1YPR028W RPN7Q06103 429 aaKnown RBP2.66□□□□□ -1.98
YOP1YPR028W TUP1P16649 713 aa2.65□□□□□ -1.99
YOP1YPR028W GAL11P19659 1081 aa2.65□□□□□ -1.99
YOP1YPR028W VBA3P25594 458 aa2.65□□□□□ -1.99
YOP1YPR028W YEL1P34225 687 aa2.65□□□□□ -1.99
YOP1YPR028W MCD4P36051 919 aa2.65□□□□□ -1.99
YOP1YPR028W YKR051WP36142 418 aa2.65□□□□□ -1.99
YOP1YPR028W YNL195CP40168 261 aa2.65□□□□□ -1.99
YOP1YPR028W NMD5P46970 1048 aa2.65□□□□□ -1.99
YOP1YPR028W ENP2P48234 707 aaKnown RBP2.65□□□□□ -1.99
YOP1YPR028W YDR179W-AQ03983 463 aa2.65□□□□□ -1.99
YOP1YPR028W NDD1Q08887 554 aa2.65□□□□□ -1.99
YOP1YPR028W RKI1Q12189 258 aa2.65□□□□□ -1.99
YOP1YPR028W SEC15P22224 910 aa2.64□□□□□ -1.99
YOP1YPR028W TSR4P25040 408 aa2.64□□□□□ -1.99
YOP1YPR028W STO1P34160 861 aaKnown RBP2.64□□□□□ -1.99
YOP1YPR028W MTC2P34246 357 aa2.64□□□□□ -1.99
YOP1YPR028W JHD1P40034 492 aa2.64□□□□□ -1.99
YOP1YPR028W GID8P40208 455 aa2.64□□□□□ -1.99
YOP1YPR028W HUL5P53119 910 aa2.64□□□□□ -1.99
YOP1YPR028W PCL10P53124 433 aa2.64□□□□□ -1.99
YOP1YPR028W DIP5P53388 608 aa2.64□□□□□ -1.99
YOP1YPR028W UFO1Q04511 668 aa2.64□□□□□ -1.99
YOP1YPR028W VPS36Q06696 566 aa2.64□□□□□ -1.99
YOP1YPR028W PRS5Q12265 496 aaKnown RBP2.64□□□□□ -1.99
YOP1YPR028W CIT2P08679 460 aa2.63□□□□□ -1.99
YOP1YPR028W FEN2P25621 512 aaKnown RBP2.63□□□□□ -1.99
YOP1YPR028W APN2P38207 520 aa2.63□□□□□ -1.99
YOP1YPR028W HSL7P38274 827 aa2.63□□□□□ -1.99
YOP1YPR028W KHA1P40309 873 aa2.63□□□□□ -1.99
YOP1YPR028W YJL049WP47048 450 aa2.63□□□□□ -1.99
YOP1YPR028W RFX1P48743 811 aa2.63□□□□□ -1.99
YOP1YPR028W ERG20P08524 352 aaKnown RBP2.62□□□□□ -1.99
YOP1YPR028W YKR018CP36114 725 aa2.62□□□□□ -1.99
YOP1YPR028W YIL077CP40508 320 aa2.62□□□□□ -1.99
YOP1YPR028W SNO3P43544 222 aa2.62□□□□□ -1.99
YOP1YPR028W YGL117WP53133 265 aa2.62□□□□□ -1.99
YOP1YPR028W SNP1Q00916 300 aaPredicted RBP2.62□□□□□ -1.99
YOP1YPR028W MRPL9P31334 269 aa2.61□□□□□ -1.99
YOP1YPR028W SEC6P32844 805 aa2.61□□□□□ -1.99
YOP1YPR028W SET2P46995 733 aaKnown RBP2.61□□□□□ -1.99
YOP1YPR028W NHX1Q04121 633 aa2.61□□□□□ -1.99
YOP1YPR028W NSE3Q05541 303 aa2.61□□□□□ -1.99
YOP1YPR028W ELF1P36053 145 aa2.6□□□□□ -1.99
YOP1YPR028W RIM4P38741 713 aa2.6□□□□□ -1.99
YOP1YPR028W GDH3P39708 457 aa2.6□□□□□ -1.99
YOP1YPR028W DOT6P40059 670 aaKnown RBP2.6□□□□□ -1.99
YOP1YPR028W NNF1P47149 201 aa2.6□□□□□ -1.99
YOP1YPR028W DAK1P54838 584 aaKnown RBP2.6□□□□□ -1.99
YOP1YPR028W RSC9Q03124 581 aa2.6□□□□□ -1.99
YOP1YPR028W YTH1Q06102 208 aaPredicted RBP2.6□□□□□ -1.99
YOP1YPR028W POM34Q12445 299 aa2.6□□□□□ -1.99
YOP1YPR028W RPS9BP05755 195 aaKnown RBP2.59□□□□□ -1.99
YOP1YPR028W STI1P15705 589 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
YOP1YPR028W PEX6P33760 1030 aa2.59□□□□□ -1.99
YOP1YPR028W COS111P38308 924 aa2.59□□□□□ -1.99
YOP1YPR028W OCA5P38738 679 aa2.59□□□□□ -1.99
YOP1YPR028W CAF16P43569 289 aa2.59□□□□□ -1.99
YOP1YPR028W CPR8P53728 308 aa2.59□□□□□ -1.99
YOP1YPR028W ARP4P80428 489 aa2.59□□□□□ -1.99
YOP1YPR028W LEE1Q02799 301 aaKnown RBP2.59□□□□□ -1.99
YOP1YPR028W TRS23Q03784 219 aa2.59□□□□□ -1.99
YOP1YPR028W YFT2Q06676 274 aa2.59□□□□□ -1.99
YOP1YPR028W ISA1Q07821 250 aaPredicted RBP2.59□□□□□ -1.99
YOP1YPR028W YOL098CQ12496 1037 aa2.59□□□□□ -1.99
YOP1YPR028W GSY1P23337 708 aa2.58□□□□□ -2
YOP1YPR028W KIN82P25341 720 aa2.58□□□□□ -2
YOP1YPR028W MET30P39014 640 aa2.58□□□□□ -2
YOP1YPR028W THI6P41835 540 aa2.58□□□□□ -2
YOP1YPR028W CDC53Q12018 815 aaKnown RBP2.58□□□□□ -2
YOP1YPR028W YPR089WO13585 888 aa2.57□□□□□ -2
YOP1YPR028W LEU2P04173 364 aaPredicted RBP2.57□□□□□ -2
YOP1YPR028W CDC9P04819 755 aa2.57□□□□□ -2
YOP1YPR028W HEM1P09950 548 aaPredicted RBP2.57□□□□□ -2
YOP1YPR028W HOG1P32485 435 aa2.57□□□□□ -2
YOP1YPR028W MSS1P32559 526 aaPredicted RBP2.57□□□□□ -2
YOP1YPR028W SDS24P38314 527 aa2.57□□□□□ -2
YOP1YPR028W BUD6P41697 788 aa2.57□□□□□ -2
YOP1YPR028W MAL11P53048 616 aa2.57□□□□□ -2
YOP1YPR028W SNF12P53628 566 aa2.57□□□□□ -2
YOP1YPR028W BRE5P53741 515 aaKnown RBP2.57□□□□□ -2
YOP1YPR028W ERR1P0CX10 437 aa2.56□□□□□ -2
YOP1YPR028W ERR2P0CX11 437 aa2.56□□□□□ -2
YOP1YPR028W MIH1P23748 554 aa2.56□□□□□ -2
YOP1YPR028W SLX1P38324 304 aa2.56□□□□□ -2
YOP1YPR028W PIH1P38768 344 aa2.56□□□□□ -2
YOP1YPR028W DUN1P39009 513 aa2.56□□□□□ -2
YOP1YPR028W DSS1P39112 969 aa2.56□□□□□ -2
YOP1YPR028W GPD1Q00055 391 aaKnown RBP2.56□□□□□ -2
YOP1YPR028W RPN4Q03465 531 aa2.56□□□□□ -2
YOP1YPR028W ENT2Q05785 613 aa2.56□□□□□ -2
YOP1YPR028W IZH3Q07959 543 aa2.56□□□□□ -2
YOP1YPR028W BUD7Q08754 746 aa2.56□□□□□ -2
YOP1YPR028W ZPS1Q12512 249 aa2.56□□□□□ -2
YOP1YPR028W PMA2P19657 947 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 87.8 ms