RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B EAR1Q03212 550 aa2.09□□□□□ -2.07
YOR343W-BYOR343W-B HMG1P12683 1054 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B GSY2P27472 705 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B SEC21P32074 935 aaKnown RBP2.09□□□□□ -2.08
YOR343W-BYOR343W-B MSS1P32559 526 aaPredicted RBP2.09□□□□□ -2.08
YOR343W-BYOR343W-B PPG1P32838 368 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B YRO2P38079 344 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B FLR1P38124 548 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B PIG2P40187 538 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B RUP1Q12242 671 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B YLR149CQ99296 730 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B SUP35P05453 685 aaKnown RBP2.09□□□□□ -2.08
YOR343W-BYOR343W-B SED4P25365 1065 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B ARG2P40360 574 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B TDA10P42938 290 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B YNR014WP53719 212 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B BRE5P53741 515 aaKnown RBP2.09□□□□□ -2.08
YOR343W-BYOR343W-B MET14Q02196 202 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B RNT1Q02555 471 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B AIM6Q07716 390 aa2.09□□□□□ -2.08
YOR343W-BYOR343W-B DIA2Q08496 732 aaPredicted RBP2.09□□□□□ -2.08
YOR343W-BYOR343W-B PPH3P32345 308 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B YKU70P32807 602 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B TDP1P38319 544 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B FLC2P39719 783 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B NOC2P39744 710 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B VTC2P43585 828 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B ROK1P45818 564 aaPredicted RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B IST1P53843 298 aaPredicted RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B YLR224WQ05947 369 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B IWR1Q07532 353 aaPredicted RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B ESC8Q08119 714 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B GFA1P14742 717 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B KES1P35844 434 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B TYS1P36421 394 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B SDH8P38345 138 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B MAM1P40065 302 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B LSB3P43603 459 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B SIP4P46954 829 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B TAD1P53065 400 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B BOP3P53958 396 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B MUS81Q04149 632 aaPredicted RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B NPC2Q12408 173 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B RPS17AP02407 136 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B MET3P08536 511 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B RPS17BP14127 136 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B SWC3P31376 625 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B EFT1P32324 842 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B TGL1P34163 548 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B LST4P34239 828 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B EBP2P36049 427 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B MCM7P38132 845 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B GDT1P38301 280 aaPredicted RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B ZRG8P40021 1076 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B SBE2P42223 864 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B TAF4P50105 388 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B MNT2P53059 558 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B SDA1P53313 767 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B CPR8P53728 308 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B SSY1Q03770 852 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B MGR3Q04472 501 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B VBA4Q04602 768 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B IZH3Q07959 543 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B ZRT2Q12436 422 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B NOP58Q12499 511 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B TOP3P13099 656 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B PRE4P30657 266 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B PLC1P32383 869 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B NUP60P39705 539 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B UBP5P39944 805 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B MXR1P40029 184 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B VPS27P40343 622 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B PRM2P40534 656 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B NOP9P47077 666 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B APT1P49435 187 aaKnown RBP2.08□□□□□ -2.08
YOR343W-BYOR343W-B TIM50Q02776 476 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B DLT1Q04216 342 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B YDL073WQ07454 984 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B YOR022CQ12204 715 aa2.08□□□□□ -2.08
YOR343W-BYOR343W-B GAL10P04397 699 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B RPB2P08518 1224 aaKnown RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B ERR1P0CX10 437 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B ERR2P0CX11 437 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B PMA2P19657 947 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B DIA4P38705 446 aaPredicted RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B KAP123P40069 1113 aaKnown RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B IRC6P43615 237 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B YDL183CP48569 320 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B SFB2P53953 876 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B ATG16Q03818 150 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B GFD1Q04839 188 aaKnown RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B RPN7Q06103 429 aaKnown RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B YSH1Q06224 779 aaPredicted RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B THI72Q08579 599 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B PUS9Q12069 462 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B SWM1Q12379 170 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B RPS13P05756 151 aaKnown RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B PHO81P17442 1178 aa2.07□□□□□ -2.08
YOR343W-BYOR343W-B COX11P19516 300 aaKnown RBP2.07□□□□□ -2.08
YOR343W-BYOR343W-B KAR4P25583 335 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms