RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	PHO3	P24031	467 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	SSH4	P32343	579 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	YPT53	P36019	220 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	SAW1	P39735	261 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	RPT2	P40327	437 aa	Known RBP	4.43	□□□□□ -1.7
CAF20	YOR276W	VHR1	P40522	640 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	TEP1	P53916	434 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	YML131W	Q03102	365 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	YPS7	Q06325	596 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	ISA1	Q07821	250 aa	Predicted RBP	4.43	□□□□□ -1.7
CAF20	YOR276W	UPC2	Q12151	913 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	LAS17	Q12446	633 aa		4.43	□□□□□ -1.7
CAF20	YOR276W	MSH1	P25846	959 aa		4.42	□□□□□ -1.7
CAF20	YOR276W	DGR2	P32330	852 aa		4.42	□□□□□ -1.7
CAF20	YOR276W	SRP68	P38687	599 aa	Known RBP	4.42	□□□□□ -1.7
CAF20	YOR276W	STL1	P39932	569 aa		4.42	□□□□□ -1.7
CAF20	YOR276W	IRC5	P43610	853 aa		4.42	□□□□□ -1.7
CAF20	YOR276W	YBP2	P53169	641 aa		4.42	□□□□□ -1.7
CAF20	YOR276W	MTD1	Q02046	320 aa	Known RBP	4.42	□□□□□ -1.7
CAF20	YOR276W	COG4	Q06096	861 aa		4.42	□□□□□ -1.7
CAF20	YOR276W	BRE1	Q07457	700 aa	Known RBP	4.42	□□□□□ -1.7
CAF20	YOR276W	YEL076C-A	P0CX16	216 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	YLR464W	P0CX17	216 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	PRP4	P20053	465 aa	Known RBP	4.41	□□□□□ -1.7
CAF20	YOR276W	PET309	P32522	965 aa	Predicted RBP	4.41	□□□□□ -1.7
CAF20	YOR276W	STE14	P32584	239 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	YEL076C	P39971	216 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	SCS2	P40075	244 aa	Known RBP	4.41	□□□□□ -1.7
CAF20	YOR276W	VPS27	P40343	622 aa	Known RBP	4.41	□□□□□ -1.7
CAF20	YOR276W	IES1	P43579	692 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	PRP31	P49704	494 aa	Predicted RBP	4.41	□□□□□ -1.7
CAF20	YOR276W	ASI2	P53895	289 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	PKH1	Q03407	766 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	HLR1	Q04429	423 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	STP4	Q07351	490 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	VHS3	Q08438	674 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	MCH5	Q08777	521 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	SWM1	Q12379	170 aa		4.41	□□□□□ -1.7
CAF20	YOR276W	TUB3	P09734	445 aa	Known RBP	4.4	□□□□□ -1.71
CAF20	YOR276W	PYC1	P11154	1178 aa	Known RBP	4.4	□□□□□ -1.71
CAF20	YOR276W	MSM1	P22438	575 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	KAR4	P25583	335 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	SEC21	P32074	935 aa	Known RBP	4.4	□□□□□ -1.71
CAF20	YOR276W	BEM3	P32873	1128 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	OAR1	P35731	278 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	MOH1	P38191	138 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	YNL195C	P40168	261 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	MAD3	P47074	515 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	BUL1	P48524	976 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	UBA2	P52488	636 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	GTR1	Q00582	310 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	RCR2	Q03446	210 aa	Known RBP	4.4	□□□□□ -1.71
CAF20	YOR276W	CIA1	Q05583	330 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	SGO1	Q08490	590 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	SSP2	Q08646	371 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	PSF3	Q12146	194 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	ARP7	Q12406	477 aa		4.4	□□□□□ -1.71
CAF20	YOR276W	ADE2	P21264	571 aa	Known RBP	4.39	□□□□□ -1.71
CAF20	YOR276W	MF(ALPHA)2	P32435	120 aa		4.39	□□□□□ -1.71
CAF20	YOR276W	TGL1	P34163	548 aa		4.39	□□□□□ -1.71
CAF20	YOR276W	SDS22	P36047	338 aa		4.39	□□□□□ -1.71
CAF20	YOR276W	IML2	P47031	731 aa		4.39	□□□□□ -1.71
CAF20	YOR276W	COX18	P53239	316 aa		4.39	□□□□□ -1.71
CAF20	YOR276W	RTK1	Q12100	620 aa	Predicted RBP	4.39	□□□□□ -1.71
CAF20	YOR276W	YLR415C	O13578	112 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	ADH4	P10127	382 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	FRS1	P15624	595 aa	Known RBP	4.38	□□□□□ -1.71
CAF20	YOR276W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
CAF20	YOR276W	IME1	P21190	360 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	EFT1	P32324	842 aa	Known RBP	4.38	□□□□□ -1.71
CAF20	YOR276W	RPN12	P32496	274 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	APM3	P38153	483 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	YHR033W	P38690	423 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	SWD1	P39706	426 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	GID8	P40208	455 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	ENP2	P48234	707 aa	Known RBP	4.38	□□□□□ -1.71
CAF20	YOR276W	ARG5,6	Q01217	863 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	BLS1	Q06071	122 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	VPS36	Q06696	566 aa		4.38	□□□□□ -1.71
CAF20	YOR276W	CBP3	P21560	335 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	GFD2	P25370	566 aa	Known RBP	4.37	□□□□□ -1.71
CAF20	YOR276W	NGG1	P32494	702 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	PET127	P32606	800 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	SIC1	P38634	284 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	YHR112C	P38716	378 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	IMA5	P40884	581 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	TRS130	Q03660	1102 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	PEX19	Q07418	342 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	YLR040C	Q07988	224 aa		4.37	□□□□□ -1.71
CAF20	YOR276W	VAS1	P07806	1104 aa	Known RBP	4.36	□□□□□ -1.71
CAF20	YOR276W	MCM10	P32354	571 aa		4.36	□□□□□ -1.71
CAF20	YOR276W	APL2	P36000	726 aa	Predicted RBP	4.36	□□□□□ -1.71
CAF20	YOR276W	APT2	P36973	181 aa		4.36	□□□□□ -1.71
CAF20	YOR276W	PSY4	P38193	441 aa		4.36	□□□□□ -1.71
CAF20	YOR276W	YBR259W	P38338	688 aa		4.36	□□□□□ -1.71
CAF20	YOR276W	SPC72	P39723	622 aa		4.36	□□□□□ -1.71
CAF20	YOR276W	MAD2	P40958	196 aa		4.36	□□□□□ -1.71
CAF20	YOR276W	BUD8	P41698	603 aa		4.36	□□□□□ -1.71
CAF20	YOR276W	PUS4	P48567	403 aa	Known RBP	4.36	□□□□□ -1.71
CAF20	YOR276W	TAF4	P50105	388 aa		4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms