RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROD1	YOR018W	RPA49	Q01080	415 aa	Predicted RBP	4.09	□□□□□ -1.76
ROD1	YOR018W	PNG1	Q02890	363 aa		4.09	□□□□□ -1.76
ROD1	YOR018W	ELP3	Q02908	557 aa	Known RBP	4.09	□□□□□ -1.76
ROD1	YOR018W	VAC14	Q06708	880 aa		4.09	□□□□□ -1.76
ROD1	YOR018W	GYP1	Q08484	637 aa		4.09	□□□□□ -1.76
ROD1	YOR018W	HIF1	Q12373	385 aa		4.09	□□□□□ -1.76
ROD1	YOR018W	EMP46	Q12396	444 aa		4.09	□□□□□ -1.76
ROD1	YOR018W	BI3	Q9ZZW7	517 aa		4.09	□□□□□ -1.76
ROD1	YOR018W	AI5_BETA	Q9ZZX0	354 aa		4.09	□□□□□ -1.76
ROD1	YOR018W	RSA4	P25382	515 aa	Known RBP	4.08	□□□□□ -1.76
ROD1	YOR018W	SIF2	P38262	535 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	RIM4	P38741	713 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	ALD5	P40047	520 aa	Known RBP	4.08	□□□□□ -1.76
ROD1	YOR018W	KAP123	P40069	1113 aa	Known RBP	4.08	□□□□□ -1.76
ROD1	YOR018W	ASG1	P40467	964 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	SDS3	P40505	327 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	PHO86	P46956	311 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	ESBP6	P53918	673 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	ALG11	P53954	548 aa	Known RBP	4.08	□□□□□ -1.76
ROD1	YOR018W	YDR222W	Q04925	415 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	YPR027C	Q12079	277 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	OSH2	Q12451	1283 aa		4.08	□□□□□ -1.76
ROD1	YOR018W	RPT1	P33299	467 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	VPS35	P34110	944 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	DYS1	P38791	387 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	QNS1	P38795	714 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	SIP5	P40210	489 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	RPT2	P40327	437 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	DAS1	P47005	663 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	GPD1	Q00055	391 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	SML1	Q04964	104 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	ESC2	Q06340	456 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	PLP2	Q12017	286 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	GAL10	P04397	699 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	PHO4	P07270	312 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	SNA3	P14359	133 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	ADE2	P21264	571 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	HXT1	P32465	570 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	NMD3	P38861	518 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	SMC2	P38989	1170 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	SAH1	P39954	449 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	LAM5	P43560	674 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	ALT1	P52893	592 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	YNL134C	P53912	376 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	SLG1	P54867	378 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	SYH1	Q02875	849 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	INA17	Q02888	182 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	HOS3	Q02959	697 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	URH1	Q04179	340 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	MAG2	Q06436	670 aa	Known RBP	4.07	□□□□□ -1.76
ROD1	YOR018W	PCD1	Q12524	340 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	MOT1	P32333	1867 aa		4.07	□□□□□ -1.76
ROD1	YOR018W	RAD10	P06838	210 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	HXT3	P32466	567 aa	Known RBP	4.06	□□□□□ -1.76
ROD1	YOR018W	TIM23	P32897	222 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	SKG6	P32900	734 aa	Predicted RBP	4.06	□□□□□ -1.76
ROD1	YOR018W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
ROD1	YOR018W	RRT2	P38332	387 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	HIS2	P38635	335 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	AVT2	P39981	480 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	LCP5	P40079	357 aa	Predicted RBP	4.06	□□□□□ -1.76
ROD1	YOR018W	FTR1	P40088	404 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	NDC80	P40460	691 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	NMD5	P46970	1048 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	KAP114	P53067	1004 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	PUS2	P53167	370 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	RIM8	P53179	542 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	YNL165W	P53891	406 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	GIS3	Q12418	502 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	KIP2	P28743	706 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	EFB1	P32471	206 aa	Known RBP	4.06	□□□□□ -1.76
ROD1	YOR018W	ISC10	P32645	267 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	TBS1	P38114	1094 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	PCM1	P38628	557 aa	Known RBP	4.06	□□□□□ -1.76
ROD1	YOR018W	TMN3	P40071	706 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	AIM21	P40563	679 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	JJJ3	P47138	172 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	RSM26	P47141	266 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	BTN2	P53286	410 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	ACM1	Q08981	209 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	DAS2	Q12084	232 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	REC8	Q12188	680 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	SFI1	Q12369	946 aa		4.06	□□□□□ -1.76
ROD1	YOR018W	PRC1	P00729	532 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	NAT1	P12945	854 aa	Known RBP	4.05	□□□□□ -1.76
ROD1	YOR018W	SAT4	P25333	603 aa	Known RBP	4.05	□□□□□ -1.76
ROD1	YOR018W	VBA3	P25594	458 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	GCD6	P32501	712 aa	Known RBP	4.05	□□□□□ -1.76
ROD1	YOR018W	UTR2	P32623	467 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	VBA5	P36172	582 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	ABZ1	P37254	787 aa	Predicted RBP	4.05	□□□□□ -1.76
ROD1	YOR018W	XDJ1	P39102	459 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	GEM1	P39722	662 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	COS5	P47187	383 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	SHE10	P53075	577 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	YGR021W	P53212	290 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	NOG2	P53742	486 aa	Known RBP	4.05	□□□□□ -1.76
ROD1	YOR018W	MUB1	Q03162	620 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	HFI1	Q12060	488 aa		4.05	□□□□□ -1.76
ROD1	YOR018W	VPS54	Q12071	889 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms