RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C STL1P39932 569 aa2.87□□□□□ -1.95
DNL4YOR005C VID28P40547 921 aa2.87□□□□□ -1.95
DNL4YOR005C SMK1P41808 388 aa2.87□□□□□ -1.95
DNL4YOR005C SHR5P41912 237 aa2.87□□□□□ -1.95
DNL4YOR005C SBE2P42223 864 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C MAD3P47074 515 aa2.87□□□□□ -1.95
DNL4YOR005C PCL10P53124 433 aa2.87□□□□□ -1.95
DNL4YOR005C SXM1Q04175 944 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C CRR1Q05790 422 aa2.87□□□□□ -1.95
DNL4YOR005C YPR196WQ06595 470 aa2.87□□□□□ -1.95
DNL4YOR005C NGL1Q08213 363 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C VHS3Q08438 674 aa2.87□□□□□ -1.95
DNL4YOR005C PUS7Q08647 676 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C NSI1Q12457 570 aa2.87□□□□□ -1.95
DNL4YOR005C BNR1P40450 1375 aa2.87□□□□□ -1.95
DNL4YOR005C ADH4P10127 382 aa2.87□□□□□ -1.95
DNL4YOR005C MRP7P12687 371 aa2.87□□□□□ -1.95
DNL4YOR005C GLN4P13188 809 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C NCP1P16603 691 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C SUI2P20459 304 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C HXT4P32467 576 aa2.87□□□□□ -1.95
DNL4YOR005C PAH1P32567 862 aa2.87□□□□□ -1.95
DNL4YOR005C TGL1P34163 548 aa2.87□□□□□ -1.95
DNL4YOR005C FLR1P38124 548 aa2.87□□□□□ -1.95
DNL4YOR005C YHR202WP38887 602 aa2.87□□□□□ -1.95
DNL4YOR005C SLN1P39928 1220 aaPredicted RBP2.87□□□□□ -1.95
DNL4YOR005C KAP123P40069 1113 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C YFL052WP43551 465 aa2.87□□□□□ -1.95
DNL4YOR005C ROG3P43602 733 aa2.87□□□□□ -1.95
DNL4YOR005C HFM1P51979 1187 aa2.87□□□□□ -1.95
DNL4YOR005C ALT1P52893 592 aa2.87□□□□□ -1.95
DNL4YOR005C ZIP2P53061 704 aa2.87□□□□□ -1.95
DNL4YOR005C SCW11P53189 542 aa2.87□□□□□ -1.95
DNL4YOR005C YAP1802P53309 568 aa2.87□□□□□ -1.95
DNL4YOR005C NOP15P53927 220 aaPredicted RBP2.87□□□□□ -1.95
DNL4YOR005C MTD1Q02046 320 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C ARA2Q04212 335 aa2.87□□□□□ -1.95
DNL4YOR005C YPL277CQ08989 487 aa2.87□□□□□ -1.95
DNL4YOR005C COQ4O13525 335 aa2.87□□□□□ -1.95
DNL4YOR005C SNF1P06782 633 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C MSP1P28737 362 aa2.87□□□□□ -1.95
DNL4YOR005C KNS1P32350 737 aaPredicted RBP2.87□□□□□ -1.95
DNL4YOR005C STE13P33894 931 aa2.87□□□□□ -1.95
DNL4YOR005C ECM21P38167 1117 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C AXL2P38928 823 aa2.87□□□□□ -1.95
DNL4YOR005C SCS2P40075 244 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C DPH1P40487 425 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C RSC1P53236 928 aa2.87□□□□□ -1.95
DNL4YOR005C BRE5P53741 515 aaKnown RBP2.87□□□□□ -1.95
DNL4YOR005C DSE4P53753 1117 aa2.87□□□□□ -1.95
DNL4YOR005C MRPL13Q02204 264 aa2.87□□□□□ -1.95
DNL4YOR005C YKR011CQ02209 353 aa2.87□□□□□ -1.95
DNL4YOR005C TPP1Q03796 238 aa2.87□□□□□ -1.95
DNL4YOR005C SPN1Q06505 410 aaPredicted RBP2.87□□□□□ -1.95
DNL4YOR005C PSF3Q12146 194 aa2.87□□□□□ -1.95
DNL4YOR005C SCM3Q12334 223 aa2.87□□□□□ -1.95
DNL4YOR005C VMR1P38735 1592 aa2.86□□□□□ -1.95
DNL4YOR005C USO1P25386 1790 aa2.86□□□□□ -1.95
DNL4YOR005C AAC3P18238 307 aa2.86□□□□□ -1.95
DNL4YOR005C SPE2P21182 396 aa2.86□□□□□ -1.95
DNL4YOR005C UBC1P21734 215 aaKnown RBP2.86□□□□□ -1.95
DNL4YOR005C SLC1P33333 303 aa2.86□□□□□ -1.95
DNL4YOR005C YKL050CP35736 922 aa2.86□□□□□ -1.95
DNL4YOR005C SAP190P36123 1033 aa2.86□□□□□ -1.95
DNL4YOR005C GPT2P36148 743 aa2.86□□□□□ -1.95
DNL4YOR005C SWD1P39706 426 aa2.86□□□□□ -1.95
DNL4YOR005C PUG1P40100 303 aa2.86□□□□□ -1.95
DNL4YOR005C RIC1P40395 1056 aa2.86□□□□□ -1.95
DNL4YOR005C BFA1P47113 574 aa2.86□□□□□ -1.95
DNL4YOR005C CPR6P53691 371 aaKnown RBP2.86□□□□□ -1.95
DNL4YOR005C GSF2Q04697 403 aaKnown RBP2.86□□□□□ -1.95
DNL4YOR005C OSW2Q12202 724 aa2.86□□□□□ -1.95
DNL4YOR005C VPS5Q92331 675 aa2.86□□□□□ -1.95
DNL4YOR005C PDR11P40550 1411 aa2.86□□□□□ -1.95
DNL4YOR005C MLP1Q02455 1875 aaKnown RBP2.86□□□□□ -1.95
DNL4YOR005C SEM1O94742 89 aa2.86□□□□□ -1.95
DNL4YOR005C SPS1P08458 490 aa2.86□□□□□ -1.95
DNL4YOR005C MCM3P24279 971 aaKnown RBP2.86□□□□□ -1.95
DNL4YOR005C CMK1P27466 446 aaKnown RBP2.86□□□□□ -1.95
DNL4YOR005C MF(ALPHA)2P32435 120 aa2.86□□□□□ -1.95
DNL4YOR005C PPE1P38796 400 aa2.86□□□□□ -1.95
DNL4YOR005C DUN1P39009 513 aa2.86□□□□□ -1.95
DNL4YOR005C IMA5P40884 581 aa2.86□□□□□ -1.95
DNL4YOR005C CEP3P40969 608 aa2.86□□□□□ -1.95
DNL4YOR005C VID22Q05934 901 aa2.86□□□□□ -1.95
DNL4YOR005C YLR407WQ06070 228 aa2.86□□□□□ -1.95
DNL4YOR005C XYL2Q07993 356 aa2.86□□□□□ -1.95
DNL4YOR005C HAL9Q12180 1030 aa2.86□□□□□ -1.95
DNL4YOR005C YOR022CQ12204 715 aa2.86□□□□□ -1.95
DNL4YOR005C DPH6Q12429 685 aa2.86□□□□□ -1.95
DNL4YOR005C NOP58Q12499 511 aaKnown RBP2.86□□□□□ -1.95
DNL4YOR005C ENT1Q12518 454 aa2.86□□□□□ -1.95
DNL4YOR005C RPS9AO13516 197 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C PRC1P00729 532 aa2.85□□□□□ -1.95
DNL4YOR005C HSP82P02829 709 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C NUC1P08466 329 aa2.85□□□□□ -1.95
DNL4YOR005C MET8P15807 274 aa2.85□□□□□ -1.95
DNL4YOR005C TYE7P33122 291 aaPredicted RBP2.85□□□□□ -1.95
DNL4YOR005C DHR2P36009 735 aaPredicted RBP2.85□□□□□ -1.95
DNL4YOR005C NOP4P37838 685 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms