RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C SDH8P38345 138 aa5.15□□□□□ -1.58
PSE1YMR308C KEL1P38853 1164 aaKnown RBP5.15□□□□□ -1.58
PSE1YMR308C RPN10P38886 268 aaKnown RBP5.15□□□□□ -1.58
PSE1YMR308C XDJ1P39102 459 aa5.15□□□□□ -1.58
PSE1YMR308C YGR127WP53275 312 aa5.15□□□□□ -1.58
PSE1YMR308C TOF2Q02208 771 aa5.15□□□□□ -1.58
PSE1YMR308C RBA50Q04418 439 aa5.15□□□□□ -1.58
PSE1YMR308C ECM38Q05902 660 aaPredicted RBP5.15□□□□□ -1.58
PSE1YMR308C RGA2Q06407 1009 aa5.15□□□□□ -1.58
PSE1YMR308C PHO8P11491 566 aa5.15□□□□□ -1.58
PSE1YMR308C RPL8AP17076 256 aaKnown RBP5.15□□□□□ -1.58
PSE1YMR308C RAD53P22216 821 aa5.15□□□□□ -1.58
PSE1YMR308C CAD1P24813 409 aaKnown RBP5.15□□□□□ -1.58
PSE1YMR308C CDC15P27636 974 aa5.15□□□□□ -1.58
PSE1YMR308C RPL8BP29453 256 aaKnown RBP5.15□□□□□ -1.58
PSE1YMR308C FUN30P31380 1131 aa5.15□□□□□ -1.58
PSE1YMR308C JLP2P40206 208 aa5.15□□□□□ -1.58
PSE1YMR308C MND2P40577 368 aa5.15□□□□□ -1.58
PSE1YMR308C GNP1P48813 663 aa5.15□□□□□ -1.58
PSE1YMR308C YGR012WP53206 393 aa5.15□□□□□ -1.58
PSE1YMR308C SLT2Q00772 484 aa5.15□□□□□ -1.58
PSE1YMR308C MET14Q02196 202 aa5.15□□□□□ -1.58
PSE1YMR308C MRPS17Q03246 237 aaPredicted RBP5.15□□□□□ -1.58
PSE1YMR308C HER2Q03557 464 aa5.15□□□□□ -1.58
PSE1YMR308C VPS64Q03944 604 aa5.15□□□□□ -1.58
PSE1YMR308C KAP95Q06142 861 aaKnown RBP5.15□□□□□ -1.58
PSE1YMR308C MRL1Q06815 381 aa5.15□□□□□ -1.58
PSE1YMR308C MON2P48563 1636 aaPredicted RBP5.15□□□□□ -1.58
PSE1YMR308C ADR1P07248 1323 aa5.15□□□□□ -1.59
PSE1YMR308C BIK1P11709 440 aa5.15□□□□□ -1.59
PSE1YMR308C VPS1P21576 704 aaKnown RBP5.15□□□□□ -1.59
PSE1YMR308C NAM9P27929 486 aa5.15□□□□□ -1.59
PSE1YMR308C PBY1P38254 753 aa5.15□□□□□ -1.59
PSE1YMR308C YBR138CP38277 524 aa5.15□□□□□ -1.59
PSE1YMR308C RGD1P38339 666 aa5.15□□□□□ -1.59
PSE1YMR308C THO1P40040 218 aaKnown RBP5.15□□□□□ -1.59
PSE1YMR308C SHQ1P40486 507 aaPredicted RBP5.15□□□□□ -1.59
PSE1YMR308C POL31P46957 487 aa5.15□□□□□ -1.59
PSE1YMR308C PKH3Q03306 898 aaPredicted RBP5.15□□□□□ -1.59
PSE1YMR308C BSC2Q05611 235 aa5.15□□□□□ -1.59
PSE1YMR308C YPD1Q07688 167 aa5.15□□□□□ -1.59
PSE1YMR308C DAS2Q12084 232 aa5.15□□□□□ -1.59
PSE1YMR308C HIS4P00815 799 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C THR1P17423 357 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C DAL81P21657 970 aa5.14□□□□□ -1.59
PSE1YMR308C SED4P25365 1065 aa5.14□□□□□ -1.59
PSE1YMR308C NPL6P32832 435 aa5.14□□□□□ -1.59
PSE1YMR308C CDC27P38042 758 aa5.14□□□□□ -1.59
PSE1YMR308C VPS45P38932 577 aa5.14□□□□□ -1.59
PSE1YMR308C ASE1P50275 885 aa5.14□□□□□ -1.59
PSE1YMR308C NCS6P53088 359 aa5.14□□□□□ -1.59
PSE1YMR308C KTR6P54070 446 aa5.14□□□□□ -1.59
PSE1YMR308C GYL1Q04322 720 aa5.14□□□□□ -1.59
PSE1YMR308C WHI4Q07655 649 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C PGA3Q12746 312 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C TRM3Q07527 1436 aa5.14□□□□□ -1.59
PSE1YMR308C TUS1Q06412 1307 aa5.14□□□□□ -1.59
PSE1YMR308C ITR2P30606 609 aa5.14□□□□□ -1.59
PSE1YMR308C YUH1P35127 236 aa5.14□□□□□ -1.59
PSE1YMR308C GND1P38720 489 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C RAD55P38953 406 aa5.14□□□□□ -1.59
PSE1YMR308C STB2P46679 850 aa5.14□□□□□ -1.59
PSE1YMR308C UPF3P48412 387 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C IMD4P50094 524 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C MEP3P53390 489 aa5.14□□□□□ -1.59
PSE1YMR308C YCG1Q06680 1035 aa5.14□□□□□ -1.59
PSE1YMR308C DTD1Q07648 150 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C GUP2Q08929 609 aa5.14□□□□□ -1.59
PSE1YMR308C APL4Q12028 832 aa5.14□□□□□ -1.59
PSE1YMR308C RRG1Q12167 365 aaPredicted RBP5.14□□□□□ -1.59
PSE1YMR308C MMP1Q12372 583 aa5.14□□□□□ -1.59
PSE1YMR308C YOS9Q99220 542 aa5.14□□□□□ -1.59
PSE1YMR308C RAM2P29703 316 aa5.14□□□□□ -1.59
PSE1YMR308C DBF20P32328 564 aa5.14□□□□□ -1.59
PSE1YMR308C GDH2P33327 1092 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C RFC3P38629 340 aa5.14□□□□□ -1.59
PSE1YMR308C SPO74P45819 413 aa5.14□□□□□ -1.59
PSE1YMR308C MNN11P46985 422 aaKnown RBP5.14□□□□□ -1.59
PSE1YMR308C MAK10Q02197 733 aa5.14□□□□□ -1.59
PSE1YMR308C ARA2Q04212 335 aa5.14□□□□□ -1.59
PSE1YMR308C COX20Q04935 205 aa5.14□□□□□ -1.59
PSE1YMR308C MCM21Q06675 368 aa5.14□□□□□ -1.59
PSE1YMR308C GRS2Q06817 618 aa5.14□□□□□ -1.59
PSE1YMR308C VHS3Q08438 674 aa5.14□□□□□ -1.59
PSE1YMR308C SNF1P06782 633 aaKnown RBP5.13□□□□□ -1.59
PSE1YMR308C MDJ1P35191 511 aa5.13□□□□□ -1.59
PSE1YMR308C NTC20P38302 140 aaPredicted RBP5.13□□□□□ -1.59
PSE1YMR308C TDP1P38319 544 aa5.13□□□□□ -1.59
PSE1YMR308C SRP72P38688 640 aaKnown RBP5.13□□□□□ -1.59
PSE1YMR308C APM2P38700 605 aa5.13□□□□□ -1.59
PSE1YMR308C CEP3P40969 608 aa5.13□□□□□ -1.59
PSE1YMR308C GUS1P46655 708 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
PSE1YMR308C NOP9P47077 666 aaKnown RBP5.13□□□□□ -1.59
PSE1YMR308C GPG1P53130 126 aa5.13□□□□□ -1.59
PSE1YMR308C YGR054WP53235 642 aaKnown RBP5.13□□□□□ -1.59
PSE1YMR308C MEC3Q02574 474 aa5.13□□□□□ -1.59
PSE1YMR308C SNA4Q07549 140 aa5.13□□□□□ -1.59
PSE1YMR308C GYP5Q12344 894 aa5.13□□□□□ -1.59
PSE1YMR308C NSI1Q12457 570 aa5.13□□□□□ -1.59
PSE1YMR308C PEX1P24004 1043 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms