RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C DEF1P35732 738 aaKnown RBP6.12□□□□□ -1.43
CTF18YMR078C PEX1P24004 1043 aa6.11□□□□□ -1.43
CTF18YMR078C SRP68P38687 599 aaKnown RBP6.11□□□□□ -1.43
CTF18YMR078C PIP2P52960 996 aa6.11□□□□□ -1.43
CTF18YMR078C YLR040CQ07988 224 aa6.11□□□□□ -1.43
CTF18YMR078C MET3P08536 511 aa6.11□□□□□ -1.43
CTF18YMR078C ERG4P25340 473 aa6.11□□□□□ -1.43
CTF18YMR078C KCC4P25389 1037 aa6.11□□□□□ -1.43
CTF18YMR078C BCD1P38772 366 aa6.11□□□□□ -1.43
CTF18YMR078C NUP60P39705 539 aa6.11□□□□□ -1.43
CTF18YMR078C TAF4P50105 388 aa6.11□□□□□ -1.43
CTF18YMR078C MTD1Q02046 320 aaKnown RBP6.11□□□□□ -1.43
CTF18YMR078C IRC13Q08630 104 aa6.11□□□□□ -1.43
CTF18YMR078C ERG20P08524 352 aaKnown RBP6.1□□□□□ -1.43
CTF18YMR078C HRR25P29295 494 aaKnown RBP6.1□□□□□ -1.43
CTF18YMR078C PRE4P30657 266 aa6.1□□□□□ -1.43
CTF18YMR078C YJL163CP46996 555 aa6.1□□□□□ -1.43
CTF18YMR078C CNM67P53865 581 aaKnown RBP6.1□□□□□ -1.43
CTF18YMR078C CEG1Q01159 459 aaPredicted RBP6.1□□□□□ -1.43
CTF18YMR078C POM34Q12445 299 aa6.1□□□□□ -1.43
CTF18YMR078C CDS1P38221 457 aa6.1□□□□□ -1.43
CTF18YMR078C HRB1P38922 454 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
CTF18YMR078C NSE5Q03718 556 aa6.1□□□□□ -1.43
CTF18YMR078C VBA4Q04602 768 aaKnown RBP6.1□□□□□ -1.43
CTF18YMR078C FRE5Q08908 694 aa6.1□□□□□ -1.43
CTF18YMR078C NYV1Q12255 253 aa6.1□□□□□ -1.43
CTF18YMR078C YEL076C-AP0CX16 216 aa6.09□□□□□ -1.43
CTF18YMR078C YLR464WP0CX17 216 aa6.09□□□□□ -1.43
CTF18YMR078C CCT3P39077 534 aaKnown RBP6.09□□□□□ -1.43
CTF18YMR078C YEL076CP39971 216 aa6.09□□□□□ -1.43
CTF18YMR078C PXA1P41909 870 aa6.09□□□□□ -1.43
CTF18YMR078C UBC11P52492 156 aa6.09□□□□□ -1.43
CTF18YMR078C ESC8Q08119 714 aa6.09□□□□□ -1.43
CTF18YMR078C DGR2P32330 852 aa6.09□□□□□ -1.44
CTF18YMR078C RTK1Q12100 620 aaPredicted RBP6.09□□□□□ -1.44
CTF18YMR078C YEF3P16521 1044 aaKnown RBP6.08□□□□□ -1.44
CTF18YMR078C ADY4Q05955 493 aa6.08□□□□□ -1.44
CTF18YMR078C PMC1P38929 1173 aaPredicted RBP6.07□□□□□ -1.44
CTF18YMR078C YIL092WP40497 633 aa6.07□□□□□ -1.44
CTF18YMR078C KIN4Q01919 800 aa6.07□□□□□ -1.44
CTF18YMR078C HOP1P20050 605 aa6.07□□□□□ -1.44
CTF18YMR078C BCS1P32839 456 aa6.07□□□□□ -1.44
CTF18YMR078C KTR4P38131 464 aa6.07□□□□□ -1.44
CTF18YMR078C YHR033WP38690 423 aa6.07□□□□□ -1.44
CTF18YMR078C ALG7P07286 448 aa6.06□□□□□ -1.44
CTF18YMR078C CRG1P38892 291 aaRIP-Chip data6.06□□□□□ -1.44not detected
CTF18YMR078C PRM2P40534 656 aa6.06□□□□□ -1.44
CTF18YMR078C MAD2P40958 196 aa6.06□□□□□ -1.44
CTF18YMR078C ENP2P48234 707 aaKnown RBP6.06□□□□□ -1.44
CTF18YMR078C PUS4P48567 403 aaKnown RBP6.06□□□□□ -1.44
CTF18YMR078C YDL183CP48569 320 aa6.06□□□□□ -1.44
CTF18YMR078C PAN2P53010 1115 aaPredicted RBP6.06□□□□□ -1.44
CTF18YMR078C HOL1P53389 586 aa6.06□□□□□ -1.44
CTF18YMR078C MLC2Q06580 163 aa6.06□□□□□ -1.44
CTF18YMR078C AIM39Q08223 395 aa6.06□□□□□ -1.44
CTF18YMR078C KIN82P25341 720 aa6.06□□□□□ -1.44
CTF18YMR078C FEN2P25621 512 aaKnown RBP6.06□□□□□ -1.44
CTF18YMR078C PTP2P29461 750 aa6.06□□□□□ -1.44
CTF18YMR078C MVD1P32377 396 aaKnown RBP6.06□□□□□ -1.44
CTF18YMR078C STL1P39932 569 aa6.06□□□□□ -1.44
CTF18YMR078C MNT2P53059 558 aa6.06□□□□□ -1.44
CTF18YMR078C RNT1Q02555 471 aa6.06□□□□□ -1.44
CTF18YMR078C DIA2Q08496 732 aaPredicted RBP6.06□□□□□ -1.44
CTF18YMR078C NUR1Q12066 484 aa6.06□□□□□ -1.44
CTF18YMR078C SIR3P06701 978 aa6.05□□□□□ -1.44
CTF18YMR078C MSS18P08593 268 aa6.05□□□□□ -1.44
CTF18YMR078C PMI40P29952 429 aaKnown RBP6.05□□□□□ -1.44
CTF18YMR078C MSS1P32559 526 aaPredicted RBP6.05□□□□□ -1.44
CTF18YMR078C RMA1P36001 430 aaKnown RBP6.05□□□□□ -1.44
CTF18YMR078C SFB3P38810 929 aa6.05□□□□□ -1.44
CTF18YMR078C FTR1P40088 404 aa6.05□□□□□ -1.44
CTF18YMR078C YIL077CP40508 320 aa6.05□□□□□ -1.44
CTF18YMR078C HIS6P40545 261 aa6.05□□□□□ -1.44
CTF18YMR078C RFX1P48743 811 aa6.05□□□□□ -1.44
CTF18YMR078C YFT2Q06676 274 aa6.05□□□□□ -1.44
CTF18YMR078C DIN7Q12086 430 aa6.05□□□□□ -1.44
CTF18YMR078C RPS9BP05755 195 aaKnown RBP6.04□□□□□ -1.44
CTF18YMR078C PPR1P07272 904 aaPredicted RBP6.04□□□□□ -1.44
CTF18YMR078C PHO3P24031 467 aa6.04□□□□□ -1.44
CTF18YMR078C YKL133CP36066 463 aa6.04□□□□□ -1.44
CTF18YMR078C COS111P38308 924 aa6.04□□□□□ -1.44
CTF18YMR078C IRC24P40580 263 aa6.04□□□□□ -1.44
CTF18YMR078C PPN1Q04119 674 aa6.04□□□□□ -1.44
CTF18YMR078C YOL073CQ08232 322 aa6.04□□□□□ -1.44
CTF18YMR078C RRP6Q12149 733 aaKnown RBP6.04□□□□□ -1.44
CTF18YMR078C TUP1P16649 713 aa6.03□□□□□ -1.44
CTF18YMR078C PRP22P24384 1145 aaKnown RBP6.03□□□□□ -1.44
CTF18YMR078C YHL041WP38730 149 aa6.03□□□□□ -1.44
CTF18YMR078C GIP4P39732 760 aa6.03□□□□□ -1.44
CTF18YMR078C FMP52P40008 231 aa6.03□□□□□ -1.44
CTF18YMR078C QRI7P43122 407 aa6.03□□□□□ -1.44
CTF18YMR078C PEF1P53238 335 aa6.03□□□□□ -1.44
CTF18YMR078C SPO1P53541 631 aa6.03□□□□□ -1.44
CTF18YMR078C MLH3Q12083 715 aa6.03□□□□□ -1.44
CTF18YMR078C YOL114CQ12322 202 aa6.03□□□□□ -1.44
CTF18YMR078C HMG2P12684 1045 aa6.03□□□□□ -1.44
CTF18YMR078C HIS7P33734 552 aaKnown RBP6.03□□□□□ -1.44
CTF18YMR078C PPS1P38148 807 aa6.03□□□□□ -1.44
CTF18YMR078C SUL1P38359 859 aa6.03□□□□□ -1.44
CTF18YMR078C IES5P40060 125 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms