RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W HRB1P38922 454 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SPO20YMR017W TEL2P53038 688 aa5.56□□□□□ -1.52
SPO20YMR017W RIA1P53893 1110 aa5.56□□□□□ -1.52
SPO20YMR017W YKL033W-AQ86ZR7 236 aa5.56□□□□□ -1.52
SPO20YMR017W RPS9BP05755 195 aaKnown RBP5.55□□□□□ -1.52
SPO20YMR017W CDC26P14724 124 aa5.55□□□□□ -1.52
SPO20YMR017W KIN82P25341 720 aa5.55□□□□□ -1.52
SPO20YMR017W PLC1P32383 869 aa5.55□□□□□ -1.52
SPO20YMR017W BIT2P38346 545 aa5.55□□□□□ -1.52
SPO20YMR017W BUD8P41698 603 aa5.55□□□□□ -1.52
SPO20YMR017W SLI1P53304 468 aa5.55□□□□□ -1.52
SPO20YMR017W MUK1Q02866 612 aa5.55□□□□□ -1.52
SPO20YMR017W PNS1Q12412 539 aa5.55□□□□□ -1.52
SPO20YMR017W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SPO20YMR017W HCA4P20448 770 aaKnown RBP5.54□□□□□ -1.52
SPO20YMR017W SEC15P22224 910 aa5.54□□□□□ -1.52
SPO20YMR017W BCS1P32839 456 aa5.54□□□□□ -1.52
SPO20YMR017W SEC6P32844 805 aa5.54□□□□□ -1.52
SPO20YMR017W PXA1P41909 870 aa5.54□□□□□ -1.52
SPO20YMR017W SPC105P53148 917 aa5.54□□□□□ -1.52
SPO20YMR017W PPN1Q04119 674 aa5.54□□□□□ -1.52
SPO20YMR017W IOC4Q04213 475 aa5.54□□□□□ -1.52
SPO20YMR017W KAR1P11927 433 aa5.53□□□□□ -1.52
SPO20YMR017W COX11P19516 300 aaKnown RBP5.53□□□□□ -1.52
SPO20YMR017W ATP12P22135 325 aa5.53□□□□□ -1.52
SPO20YMR017W PRP22P24384 1145 aaKnown RBP5.53□□□□□ -1.52
SPO20YMR017W FEN2P25621 512 aaKnown RBP5.53□□□□□ -1.52
SPO20YMR017W PHO11P35842 467 aa5.53□□□□□ -1.52
SPO20YMR017W PHO12P38693 467 aa5.53□□□□□ -1.52
SPO20YMR017W YHL017WP38745 532 aa5.53□□□□□ -1.52
SPO20YMR017W PCL5P38794 229 aa5.53□□□□□ -1.52
SPO20YMR017W PIG2P40187 538 aa5.53□□□□□ -1.52
SPO20YMR017W YIL077CP40508 320 aa5.53□□□□□ -1.52
SPO20YMR017W TAF4P50105 388 aa5.53□□□□□ -1.52
SPO20YMR017W FHN1P53279 174 aa5.53□□□□□ -1.52
SPO20YMR017W YAP1802P53309 568 aa5.53□□□□□ -1.52
SPO20YMR017W CTF4Q01454 927 aa5.53□□□□□ -1.52
SPO20YMR017W ACF2Q12168 779 aa5.53□□□□□ -1.52
SPO20YMR017W CLF1Q12309 687 aaPredicted RBP5.53□□□□□ -1.52
SPO20YMR017W ZRT2Q12436 422 aa5.53□□□□□ -1.52
SPO20YMR017W HEM12P32347 362 aaPredicted RBP5.52□□□□□ -1.53
SPO20YMR017W HXT4P32467 576 aa5.52□□□□□ -1.53
SPO20YMR017W NSE5Q03718 556 aa5.52□□□□□ -1.53
SPO20YMR017W CHS5Q12114 671 aaKnown RBP5.52□□□□□ -1.53
SPO20YMR017W ACO1P19414 778 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
SPO20YMR017W PRP28P23394 588 aa5.51□□□□□ -1.53
SPO20YMR017W MF(ALPHA)2P32435 120 aa5.51□□□□□ -1.53
SPO20YMR017W ENP2P48234 707 aaKnown RBP5.51□□□□□ -1.53
SPO20YMR017W RFX1P48743 811 aa5.51□□□□□ -1.53
SPO20YMR017W SLD3P53135 668 aa5.51□□□□□ -1.53
SPO20YMR017W SPO1P53541 631 aa5.51□□□□□ -1.53
SPO20YMR017W SSL2Q00578 843 aa5.51□□□□□ -1.53
SPO20YMR017W TIM44Q01852 431 aa5.51□□□□□ -1.53
SPO20YMR017W NGL1Q08213 363 aaKnown RBP5.51□□□□□ -1.53
SPO20YMR017W MCH5Q08777 521 aa5.51□□□□□ -1.53
SPO20YMR017W DGR2P32330 852 aa5.5□□□□□ -1.53
SPO20YMR017W MOH1P38191 138 aa5.5□□□□□ -1.53
SPO20YMR017W COS111P38308 924 aa5.5□□□□□ -1.53
SPO20YMR017W EMP65P40085 556 aa5.5□□□□□ -1.53
SPO20YMR017W STB4P50104 949 aa5.5□□□□□ -1.53
SPO20YMR017W PHM6Q05637 104 aa5.5□□□□□ -1.53
SPO20YMR017W ECM38Q05902 660 aaPredicted RBP5.5□□□□□ -1.53
SPO20YMR017W YFT2Q06676 274 aa5.5□□□□□ -1.53
SPO20YMR017W HBT1Q07653 1046 aaKnown RBP5.5□□□□□ -1.53
SPO20YMR017W PEX15Q08215 383 aa5.5□□□□□ -1.53
SPO20YMR017W MLH3Q12083 715 aa5.5□□□□□ -1.53
SPO20YMR017W THR1P17423 357 aaKnown RBP5.49□□□□□ -1.53
SPO20YMR017W PRE4P30657 266 aa5.49□□□□□ -1.53
SPO20YMR017W OAR1P35731 278 aa5.49□□□□□ -1.53
SPO20YMR017W GRX7P38068 203 aa5.49□□□□□ -1.53
SPO20YMR017W CBR1P38626 284 aaKnown RBP5.49□□□□□ -1.53
SPO20YMR017W YHR033WP38690 423 aa5.49□□□□□ -1.53
SPO20YMR017W PEA2P40091 420 aa5.49□□□□□ -1.53
SPO20YMR017W PEX8P53248 589 aa5.49□□□□□ -1.53
SPO20YMR017W USV1Q12132 391 aa5.49□□□□□ -1.53
SPO20YMR017W MPS3P47069 682 aa5.48□□□□□ -1.53
SPO20YMR017W YNL034WP53963 612 aa5.48□□□□□ -1.53
SPO20YMR017W YNL018CP53976 612 aa5.48□□□□□ -1.53
SPO20YMR017W SMX3P54999 86 aaPredicted RBP5.48□□□□□ -1.53
SPO20YMR017W SND1Q04007 877 aa5.48□□□□□ -1.53
SPO20YMR017W SRP68P38687 599 aaKnown RBP5.47□□□□□ -1.53
SPO20YMR017W PRM2P40534 656 aa5.47□□□□□ -1.53
SPO20YMR017W TUP1P16649 713 aa5.46□□□□□ -1.54
SPO20YMR017W NTH1P32356 751 aa5.46□□□□□ -1.54
SPO20YMR017W MSS1P32559 526 aaPredicted RBP5.46□□□□□ -1.54
SPO20YMR017W MTC7P32633 139 aa5.46□□□□□ -1.54
SPO20YMR017W SET3P36124 751 aa5.46□□□□□ -1.54
SPO20YMR017W CRG1P38892 291 aaRIP-Chip data5.46□□□□□ -1.54not detected
SPO20YMR017W NDC80P40460 691 aa5.46□□□□□ -1.54
SPO20YMR017W SDS3P40505 327 aa5.46□□□□□ -1.54
SPO20YMR017W IRC5P43610 853 aa5.46□□□□□ -1.54
SPO20YMR017W CWC2Q12046 339 aaPredicted RBP5.46□□□□□ -1.54
SPO20YMR017W TMA7Q3E764 64 aaKnown RBP5.46□□□□□ -1.54
SPO20YMR017W YEL076C-AP0CX16 216 aa5.45□□□□□ -1.54
SPO20YMR017W YLR464WP0CX17 216 aa5.45□□□□□ -1.54
SPO20YMR017W CTP1P38152 299 aa5.45□□□□□ -1.54
SPO20YMR017W YEL076CP39971 216 aa5.45□□□□□ -1.54
SPO20YMR017W EAF5P39995 279 aa5.45□□□□□ -1.54
SPO20YMR017W FTR1P40088 404 aa5.45□□□□□ -1.54
SPO20YMR017W ARG2P40360 574 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms