RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene SDS3, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS3	YIL084C	SLU7	Q02775	382 aa	Known RBP	5.09	□□□□□ -1.59
SDS3	YIL084C	MTQ2	Q03920	221 aa	Predicted RBP	5.09	□□□□□ -1.59
SDS3	YIL084C	SNF2	P22082	1703 aa		5.09	□□□□□ -1.6
SDS3	YIL084C	YBR259W	P38338	688 aa		5.08	□□□□□ -1.6
SDS3	YIL084C	SIC1	P38634	284 aa		5.08	□□□□□ -1.6
SDS3	YIL084C	NRG1	Q03125	231 aa		5.08	□□□□□ -1.6
SDS3	YIL084C	RIM15	P43565	1770 aa		5.08	□□□□□ -1.6
SDS3	YIL084C	PMA1	P05030	918 aa	Known RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	TRP4	P07285	380 aa	Predicted RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	SSB1	P11484	613 aa	Known RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	PRP4	P20053	465 aa	Known RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	PMI40	P29952	429 aa	Known RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	YKL133C	P36066	463 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	YKR075C	P36155	307 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	APT2	P36973	181 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	MAL31	P38156	614 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	SSB2	P40150	613 aa	Known RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	GZF3	P42944	551 aa	Known RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	RET2	P43621	546 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	YGR153W	P48238	217 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	PRP31	P49704	494 aa	Predicted RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	GPD1	Q00055	391 aa	Known RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	KIN4	Q01919	800 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	ASM4	Q05166	528 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	YTM1	Q12024	460 aa	Predicted RBP	5.07	□□□□□ -1.6
SDS3	YIL084C	GPR1	Q12361	961 aa		5.07	□□□□□ -1.6
SDS3	YIL084C	RSF2	P46974	1380 aa		5.06	□□□□□ -1.6
SDS3	YIL084C	MET3	P08536	511 aa		5.06	□□□□□ -1.6
SDS3	YIL084C	MNN4	P36044	1178 aa		5.06	□□□□□ -1.6
SDS3	YIL084C	ENP1	P38333	483 aa	Known RBP	5.06	□□□□□ -1.6
SDS3	YIL084C	GPG1	P53130	126 aa		5.06	□□□□□ -1.6
SDS3	YIL084C	AIM39	Q08223	395 aa		5.06	□□□□□ -1.6
SDS3	YIL084C	EDE1	P34216	1381 aa		5.05	□□□□□ -1.6
SDS3	YIL084C	RTC1	Q08281	1341 aa		5.05	□□□□□ -1.6
SDS3	YIL084C	ECM1	P39715	212 aa		5.05	□□□□□ -1.6
SDS3	YIL084C	GPP1	P41277	250 aa	Known RBP	5.05	□□□□□ -1.6
SDS3	YIL084C	FKH2	P41813	862 aa		5.05	□□□□□ -1.6
SDS3	YIL084C	SQS1	P53866	767 aa	Known RBP	5.05	□□□□□ -1.6
SDS3	YIL084C	LAS17	Q12446	633 aa		5.05	□□□□□ -1.6
SDS3	YIL084C	APC1	P53886	1748 aa		5.05	□□□□□ -1.6
SDS3	YIL084C	SSZ1	P38788	538 aa	Known RBP	5.04	□□□□□ -1.6
SDS3	YIL084C	YJR039W	P47107	1121 aa		5.04	□□□□□ -1.6
SDS3	YIL084C	AMA1	P50082	593 aa		5.04	□□□□□ -1.6
SDS3	YIL084C	DLT1	Q04216	342 aa		5.04	□□□□□ -1.6
SDS3	YIL084C	GAD1	Q04792	585 aa		5.04	□□□□□ -1.6
SDS3	YIL084C	MCM21	Q06675	368 aa		5.04	□□□□□ -1.6
SDS3	YIL084C	DCS2	Q12123	353 aa		5.04	□□□□□ -1.6
SDS3	YIL084C	IKI3	Q06706	1349 aa	Known RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	CAF20	P12962	161 aa	Known RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	EFT1	P32324	842 aa	Known RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	APL2	P36000	726 aa	Predicted RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	DID4	P36108	232 aa		5.03	□□□□□ -1.6
SDS3	YIL084C	APN2	P38207	520 aa		5.03	□□□□□ -1.6
SDS3	YIL084C	OAF1	P39720	1047 aa	Predicted RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	CCT5	P40413	562 aa	Known RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	MNN11	P46985	422 aa	Known RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	SET2	P46995	733 aa	Known RBP	5.03	□□□□□ -1.6
SDS3	YIL084C	ARP4	P80428	489 aa		5.03	□□□□□ -1.6
SDS3	YIL084C	ARG5,6	Q01217	863 aa		5.03	□□□□□ -1.6
SDS3	YIL084C	REC102	Q02721	264 aa		5.03	□□□□□ -1.6
SDS3	YIL084C	SLM3	Q12093	417 aa		5.03	□□□□□ -1.6
SDS3	YIL084C	YEF3	P16521	1044 aa	Known RBP	5.02	□□□□□ -1.61
SDS3	YIL084C	ADE2	P21264	571 aa	Known RBP	5.02	□□□□□ -1.61
SDS3	YIL084C	HRR25	P29295	494 aa	Known RBP	5.02	□□□□□ -1.61
SDS3	YIL084C	KTR4	P38131	464 aa		5.02	□□□□□ -1.61
SDS3	YIL084C	ELO3	P40319	345 aa		5.02	□□□□□ -1.61
SDS3	YIL084C	MRPS35	P53292	345 aa		5.02	□□□□□ -1.61
SDS3	YIL084C	ERG5	P54781	538 aa		5.02	□□□□□ -1.61
SDS3	YIL084C	TGL5	Q12043	749 aa		5.02	□□□□□ -1.61
SDS3	YIL084C	ATG11	Q12527	1178 aa		5.02	□□□□□ -1.61
SDS3	YIL084C	ADE6	P38972	1358 aa	Known RBP	5.02	□□□□□ -1.61
SDS3	YIL084C	RPS24A	P0CX31	135 aa	Known RBP	5.01	□□□□□ -1.61
SDS3	YIL084C	RPS24B	P0CX32	135 aa	Known RBP	5.01	□□□□□ -1.61
SDS3	YIL084C	MRC1	P25588	1096 aa		5.01	□□□□□ -1.61
SDS3	YIL084C	DEF1	P35732	738 aa	Known RBP	5.01	□□□□□ -1.61
SDS3	YIL084C	TRZ1	P36159	838 aa	Predicted RBP	5.01	□□□□□ -1.61
SDS3	YIL084C	YIR042C	P40586	236 aa		5.01	□□□□□ -1.61
SDS3	YIL084C	BRE5	P53741	515 aa	Known RBP	5.01	□□□□□ -1.61
SDS3	YIL084C	CTK1	Q03957	528 aa	Known RBP	5.01	□□□□□ -1.61
SDS3	YIL084C	TRE2	Q08693	809 aa		5.01	□□□□□ -1.61
SDS3	YIL084C	LAT1	P12695	482 aa	Known RBP	5	□□□□□ -1.61
SDS3	YIL084C	ERG4	P25340	473 aa		5	□□□□□ -1.61
SDS3	YIL084C	AKL1	P38080	1108 aa	Known RBP	5	□□□□□ -1.61
SDS3	YIL084C	YHR202W	P38887	602 aa		5	□□□□□ -1.61
SDS3	YIL084C	MUP1	P50276	574 aa		5	□□□□□ -1.61
SDS3	YIL084C	PTA1	Q01329	785 aa	Predicted RBP	5	□□□□□ -1.61
SDS3	YIL084C	ECM9	Q02202	377 aa		5	□□□□□ -1.61
SDS3	YIL084C	TMA17	Q12513	150 aa		5	□□□□□ -1.61
SDS3	YIL084C	PYC1	P11154	1178 aa	Known RBP	4.99	□□□□□ -1.61
SDS3	YIL084C	EUG1	P32474	517 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	TOM20	P35180	183 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	YHR112C	P38716	378 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	GID8	P40208	455 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	DUG1	P43616	481 aa	Known RBP	4.99	□□□□□ -1.61
SDS3	YIL084C	BUL1	P48524	976 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	COX18	P53239	316 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	TEX1	P53851	422 aa	Known RBP	4.99	□□□□□ -1.61
SDS3	YIL084C	RNT1	Q02555	471 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	LEE1	Q02799	301 aa	Known RBP	4.99	□□□□□ -1.61
SDS3	YIL084C	YMR210W	Q03649	449 aa		4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms