RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	HCA4	P20448	770 aa	Known RBP	3.82	□□□□□ -1.8
VHR1	YIL056W	DGR2	P32330	852 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	GRX4	P32642	244 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	BCS1	P32839	456 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	NOP15	P53927	220 aa	Predicted RBP	3.82	□□□□□ -1.8
VHR1	YIL056W	HMO1	Q03973	246 aa	Known RBP	3.82	□□□□□ -1.8
VHR1	YIL056W	YPR027C	Q12079	277 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	SWI6	P09959	803 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	GLN4	P13188	809 aa	Known RBP	3.82	□□□□□ -1.8
VHR1	YIL056W	PRP28	P23394	588 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	DMC1	P25453	334 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	BIT2	P38346	545 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	YHR033W	P38690	423 aa		3.82	□□□□□ -1.8
VHR1	YIL056W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
VHR1	YIL056W	CHS5	Q12114	671 aa	Known RBP	3.82	□□□□□ -1.8
VHR1	YIL056W	FEN2	P25621	512 aa	Known RBP	3.81	□□□□□ -1.8
VHR1	YIL056W	GLG1	P36143	616 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	COS111	P38308	924 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	YJL206C	P39529	758 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	SDS3	P40505	327 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	BIT61	P47041	543 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	YPS7	Q06325	596 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	THI22	Q06490	572 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	MRH1	Q12117	320 aa	Predicted RBP	3.81	□□□□□ -1.8
VHR1	YIL056W	TMA17	Q12513	150 aa		3.81	□□□□□ -1.8
VHR1	YIL056W	GFA1	P14742	717 aa	Known RBP	3.8	□□□□□ -1.8
VHR1	YIL056W	MTH1	P35198	433 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	OAF3	P36023	863 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	SPC105	P53148	917 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	ATG4	P53867	494 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	YDL086W	Q07505	273 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	IRC10	Q08118	586 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	HFI1	Q12060	488 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	MLH3	Q12083	715 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	SIR3	P06701	978 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	RPS21A	P0C0V8	87 aa	Known RBP	3.8	□□□□□ -1.8
VHR1	YIL056W	AEP2	P22136	580 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	HXT6	P39003	570 aa	Known RBP	3.8	□□□□□ -1.8
VHR1	YIL056W	HXT7	P39004	570 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	VID28	P40547	921 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	RFX1	P48743	811 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	SPC98	P53540	846 aa		3.8	□□□□□ -1.8
VHR1	YIL056W	SMX3	P54999	86 aa	Predicted RBP	3.8	□□□□□ -1.8
VHR1	YIL056W	SSB1	P11484	613 aa	Known RBP	3.79	□□□□□ -1.8
VHR1	YIL056W	KAR1	P11927	433 aa		3.79	□□□□□ -1.8
VHR1	YIL056W	EUG1	P32474	517 aa		3.79	□□□□□ -1.8
VHR1	YIL056W	SSB2	P40150	613 aa	Known RBP	3.79	□□□□□ -1.8
VHR1	YIL056W	DUG1	P43616	481 aa	Known RBP	3.79	□□□□□ -1.8
VHR1	YIL056W	MPS3	P47069	682 aa		3.79	□□□□□ -1.8
VHR1	YIL056W	ENP2	P48234	707 aa	Known RBP	3.79	□□□□□ -1.8
VHR1	YIL056W	TAF4	P50105	388 aa		3.79	□□□□□ -1.8
VHR1	YIL056W	YGR151C	P53287	111 aa		3.79	□□□□□ -1.8
VHR1	YIL056W	SPO1	P53541	631 aa		3.79	□□□□□ -1.8
VHR1	YIL056W	KCC4	P25389	1037 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	FUB1	P25659	250 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	DAL3	P32459	195 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	APL3	P38065	1025 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	FAT1	P38225	669 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	FHN1	P53279	174 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	SKY1	Q03656	742 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	RGC1	Q06108	1083 aa	Known RBP	3.78	□□□□□ -1.8
VHR1	YIL056W	YFT2	Q06676	274 aa		3.78	□□□□□ -1.8
VHR1	YIL056W	THR1	P17423	357 aa	Known RBP	3.78	□□□□□ -1.81
VHR1	YIL056W	TDP1	P38319	544 aa		3.78	□□□□□ -1.81
VHR1	YIL056W	BUD8	P41698	603 aa		3.78	□□□□□ -1.81
VHR1	YIL056W	NMA2	P53204	395 aa		3.78	□□□□□ -1.81
VHR1	YIL056W	SQS1	P53866	767 aa	Known RBP	3.78	□□□□□ -1.81
VHR1	YIL056W	RCR2	Q03446	210 aa	Known RBP	3.78	□□□□□ -1.81
VHR1	YIL056W	YSH1	Q06224	779 aa	Predicted RBP	3.78	□□□□□ -1.81
VHR1	YIL056W	YJR120W	P47157	116 aa		3.77	□□□□□ -1.81
VHR1	YIL056W	SLD3	P53135	668 aa		3.77	□□□□□ -1.81
VHR1	YIL056W	STP4	Q07351	490 aa		3.77	□□□□□ -1.81
VHR1	YIL056W	AIM41	Q12032	185 aa		3.77	□□□□□ -1.81
VHR1	YIL056W	SPO11	P23179	398 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	GMH1	P36125	273 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	CTP1	P38152	299 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	KSP1	P38691	1029 aa	Known RBP	3.76	□□□□□ -1.81
VHR1	YIL056W	BDH2	P39713	417 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	APM4	Q99186	491 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	YBR071W	P38243	211 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	PPE1	P38796	400 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	YHR097C	P38809	366 aa	Known RBP	3.76	□□□□□ -1.81
VHR1	YIL056W	TMN3	P40071	706 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	THI6	P41835	540 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	MDR1	P53258	950 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	DIP5	P53388	608 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	FOL1	P53848	824 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	NSE5	Q03718	556 aa		3.76	□□□□□ -1.81
VHR1	YIL056W	NGL1	Q08213	363 aa	Known RBP	3.76	□□□□□ -1.81
VHR1	YIL056W	COX11	P19516	300 aa	Known RBP	3.75	□□□□□ -1.81
VHR1	YIL056W	EMP65	P40085	556 aa		3.75	□□□□□ -1.81
VHR1	YIL056W	GPP2	P40106	250 aa	Known RBP	3.75	□□□□□ -1.81
VHR1	YIL056W	PEX14	P53112	341 aa		3.75	□□□□□ -1.81
VHR1	YIL056W	VPS73	P53142	486 aa	Known RBP	3.75	□□□□□ -1.81
VHR1	YIL056W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	RIP-Chip
VHR1	YIL056W	PPZ2	P33329	710 aa		3.74	□□□□□ -1.81
VHR1	YIL056W	TFC4	P33339	1025 aa		3.74	□□□□□ -1.81
VHR1	YIL056W	ELF1	P36053	145 aa		3.74	□□□□□ -1.81
VHR1	YIL056W	SET3	P36124	751 aa		3.74	□□□□□ -1.81
VHR1	YIL056W	KHA1	P40309	873 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms