RNA–Protein interactions for RNA: YHL024W

RIM4, Transcript of Putative RNA-binding protein, yeast

Gene RIM4, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM4	YHL024W	GEA2	P39993	1459 aa	Known RBP	4.16	□□□□□ -1.74
RIM4	YHL024W	SOD2	P00447	233 aa		4.16	□□□□□ -1.74
RIM4	YHL024W	PET494	P07390	489 aa	Predicted RBP	4.16	□□□□□ -1.74
RIM4	YHL024W	CDC20	P26309	610 aa		4.16	□□□□□ -1.74
RIM4	YHL024W	CYS3	P31373	394 aa	Known RBP	4.16	□□□□□ -1.74
RIM4	YHL024W	MFT1	P33441	392 aa	Known RBP	4.16	□□□□□ -1.74
RIM4	YHL024W	MAL31	P38156	614 aa		4.16	□□□□□ -1.74
RIM4	YHL024W	NOC2	P39744	710 aa	Known RBP	4.16	□□□□□ -1.74
RIM4	YHL024W	YIL108W	P40483	696 aa	Known RBP	4.16	□□□□□ -1.74
RIM4	YHL024W	CHA4	P43634	648 aa		4.16	□□□□□ -1.74
RIM4	YHL024W	KRE28	Q04431	385 aa		4.16	□□□□□ -1.74
RIM4	YHL024W	YBR182C-A	Q8TGU6	64 aa		4.16	□□□□□ -1.74
RIM4	YHL024W	RPS9A	O13516	197 aa	Known RBP	4.15	□□□□□ -1.74
RIM4	YHL024W	HIS5	P07172	385 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	RNQ1	P25367	405 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	STE14	P32584	239 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	YME2	P32843	850 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	STO1	P34160	861 aa	Known RBP	4.15	□□□□□ -1.74
RIM4	YHL024W	TAF5	P38129	798 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	NIT1	P40447	199 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	MET18	P40469	1032 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
RIM4	YHL024W	SET2	P46995	733 aa	Known RBP	4.15	□□□□□ -1.74
RIM4	YHL024W	RTC4	P53850	401 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	YNL193W	P53870	558 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	YAP6	Q03935	383 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	RXT3	Q07458	294 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	ACK1	Q07622	623 aa	Predicted RBP	4.15	□□□□□ -1.74
RIM4	YHL024W	UPC2	Q12151	913 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	HAL9	Q12180	1030 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	YGR161W-C	Q3E744	92 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	YIL002W-A	Q3E7Z5	69 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	ADR1	P07248	1323 aa		4.15	□□□□□ -1.74
RIM4	YHL024W	PRP6	P19735	899 aa	Predicted RBP	4.15	□□□□□ -1.75
RIM4	YHL024W	STE11	P23561	717 aa		4.15	□□□□□ -1.75
RIM4	YHL024W	PCL2	P25693	308 aa		4.15	□□□□□ -1.75
RIM4	YHL024W	NIP100	P33420	868 aa		4.15	□□□□□ -1.75
RIM4	YHL024W	RKM3	P38222	552 aa		4.15	□□□□□ -1.75
RIM4	YHL024W	RIM8	P53179	542 aa		4.15	□□□□□ -1.75
RIM4	YHL024W	PNG1	Q02890	363 aa		4.15	□□□□□ -1.75
RIM4	YHL024W	TMA64	Q04600	565 aa	Known RBP	4.15	□□□□□ -1.75
RIM4	YHL024W	YOR022C	Q12204	715 aa		4.15	□□□□□ -1.75
RIM4	YHL024W	MDS3	P53094	1487 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	VTH1	P40438	1549 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	VTH2	P40890	1549 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	RAD18	P10862	487 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	PET123	P17558	318 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	MIH1	P23748	554 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	PAP1	P29468	568 aa	Known RBP	4.14	□□□□□ -1.75
RIM4	YHL024W	CSE1	P33307	960 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	THI80	P35202	319 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	RLP7	P40693	322 aa	Known RBP	4.14	□□□□□ -1.75
RIM4	YHL024W	AVT1	P47082	602 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	SPT20	P50875	604 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	NCS6	P53088	359 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	NOP12	Q08208	459 aa	Known RBP	4.14	□□□□□ -1.75
RIM4	YHL024W	THI21	Q08975	551 aa		4.14	□□□□□ -1.75
RIM4	YHL024W	PHO84	P25297	587 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	KAR9	P32526	644 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	MRE11	P32829	692 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	SEC66	P33754	206 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	CTF8	P38877	133 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	STN1	P38960	494 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	SPC72	P39723	622 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	LAM5	P43560	674 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	IES1	P43579	692 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
RIM4	YHL024W	ESF2	P53743	316 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	SNP1	Q00916	300 aa	Predicted RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	SNZ1	Q03148	297 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	PHM6	Q05637	104 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	DNL4	Q08387	944 aa	Predicted RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	GCN2	P15442	1659 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	CYB2	P00175	591 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	CDC37	P06101	506 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	TPM1	P17536	199 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	APD1	P38281	316 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	OSH3	P38713	996 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	UTP18	P40362	594 aa	Predicted RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	SDP1	P40479	209 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	ALY2	P47029	1046 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	SRB7	P47822	140 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	ENP2	P48234	707 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	YNR029C	P53729	429 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	DUS1	P53759	423 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	MDM1	Q01846	1127 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	FUS2	Q05670	677 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	YLR224W	Q05947	369 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	ARV1	Q06541	321 aa		4.13	□□□□□ -1.75
RIM4	YHL024W	CSR1	Q06705	408 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	YPL225W	Q08971	146 aa	Known RBP	4.13	□□□□□ -1.75
RIM4	YHL024W	PDR5	P33302	1511 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	IQG1	Q12280	1495 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	PDR18	P53756	1333 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	PRC1	P00729	532 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	SUI2	P20459	304 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	APN1	P22936	367 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	MRPL25	P23369	157 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	SWC3	P31376	625 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	SFP1	P32432	683 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms