RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W DBP10Q12389 995 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W PAB1P04147 577 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SPT6YGR116W RPL8AP17076 256 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W MSH2P25847 964 aa3.81□□□□□ -1.8
SPT6YGR116W ATO2P32907 282 aa3.81□□□□□ -1.8
SPT6YGR116W RPC34P32910 317 aa3.81□□□□□ -1.8
SPT6YGR116W NCL1P38205 684 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W STN1P38960 494 aa3.81□□□□□ -1.8
SPT6YGR116W SWP1Q02795 286 aa3.81□□□□□ -1.8
SPT6YGR116W GYP1Q08484 637 aa3.81□□□□□ -1.8
SPT6YGR116W SNX3Q08826 162 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W YEL076C-AP0CX16 216 aa3.81□□□□□ -1.8
SPT6YGR116W YLR464WP0CX17 216 aa3.81□□□□□ -1.8
SPT6YGR116W PHO8P11491 566 aa3.81□□□□□ -1.8
SPT6YGR116W UBA1P22515 1024 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W MLS1P30952 554 aa3.81□□□□□ -1.8
SPT6YGR116W SLM4P38247 162 aa3.81□□□□□ -1.8
SPT6YGR116W TSC10P38342 320 aa3.81□□□□□ -1.8
SPT6YGR116W ORC6P38826 435 aa3.81□□□□□ -1.8
SPT6YGR116W YEL076CP39971 216 aa3.81□□□□□ -1.8
SPT6YGR116W MAM33P40513 266 aa3.81□□□□□ -1.8
SPT6YGR116W ALA1P40825 983 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W LSB1P53281 241 aa3.81□□□□□ -1.8
SPT6YGR116W FOL1P53848 824 aa3.81□□□□□ -1.8
SPT6YGR116W YDR239CQ03780 787 aa3.81□□□□□ -1.8
SPT6YGR116W YCS4Q06156 1176 aa3.81□□□□□ -1.8
SPT6YGR116W ATG26Q06321 1198 aa3.81□□□□□ -1.8
SPT6YGR116W NOP12Q08208 459 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W UIP4Q08926 304 aa3.81□□□□□ -1.8
SPT6YGR116W RSA1Q08932 381 aa3.81□□□□□ -1.8
SPT6YGR116W SSC1P0CS90 654 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W CHS2P14180 963 aa3.81□□□□□ -1.8
SPT6YGR116W CBF1P17106 351 aa3.81□□□□□ -1.8
SPT6YGR116W PRP6P19735 899 aaPredicted RBP3.81□□□□□ -1.8
SPT6YGR116W PET112P33893 541 aa3.81□□□□□ -1.8
SPT6YGR116W VPS45P38932 577 aa3.81□□□□□ -1.8
SPT6YGR116W FTR1P40088 404 aa3.81□□□□□ -1.8
SPT6YGR116W SNL1P40548 159 aa3.81□□□□□ -1.8
SPT6YGR116W FAR3P46671 204 aa3.81□□□□□ -1.8
SPT6YGR116W COG2P53271 262 aa3.81□□□□□ -1.8
SPT6YGR116W CNM67P53865 581 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W URC2Q04411 772 aa3.81□□□□□ -1.8
SPT6YGR116W FMP42Q04991 504 aa3.81□□□□□ -1.8
SPT6YGR116W FAL1Q12099 399 aaKnown RBP3.81□□□□□ -1.8
SPT6YGR116W NOT5Q12514 560 aaPredicted RBP3.81□□□□□ -1.8
SPT6YGR116W KSS1P14681 368 aa3.8□□□□□ -1.8
SPT6YGR116W RET1P22276 1149 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W PUF4P25339 888 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SPT6YGR116W GPI10P30777 616 aa3.8□□□□□ -1.8
SPT6YGR116W RAD54P32863 898 aa3.8□□□□□ -1.8
SPT6YGR116W PRP40P33203 583 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W TBS1P38114 1094 aa3.8□□□□□ -1.8
SPT6YGR116W SMF2P38778 549 aa3.8□□□□□ -1.8
SPT6YGR116W YFH7P43591 353 aa3.8□□□□□ -1.8
SPT6YGR116W IRC5P43610 853 aa3.8□□□□□ -1.8
SPT6YGR116W ARC1P46672 376 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W HLJ1P48353 224 aa3.8□□□□□ -1.8
SPT6YGR116W COP1P53622 1201 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W FIN1Q03898 291 aa3.8□□□□□ -1.8
SPT6YGR116W PRM6Q04705 352 aa3.8□□□□□ -1.8
SPT6YGR116W SPC2Q04969 178 aa3.8□□□□□ -1.8
SPT6YGR116W ENT2Q05785 613 aa3.8□□□□□ -1.8
SPT6YGR116W MCM21Q06675 368 aa3.8□□□□□ -1.8
SPT6YGR116W DIA2Q08496 732 aaPredicted RBP3.8□□□□□ -1.8
SPT6YGR116W LSO1Q3E827 93 aa3.8□□□□□ -1.8
SPT6YGR116W FAR1P21268 830 aa3.8□□□□□ -1.8
SPT6YGR116W GFD2P25370 566 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W MGT1P26188 188 aa3.8□□□□□ -1.8
SPT6YGR116W ICL1P28240 557 aaPredicted RBP3.8□□□□□ -1.8
SPT6YGR116W CAP1P28495 268 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W RAD14P28519 371 aa3.8□□□□□ -1.8
SPT6YGR116W SMI1P32566 505 aa3.8□□□□□ -1.8
SPT6YGR116W SMY2P32909 740 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W NTR2P36118 322 aaPredicted RBP3.8□□□□□ -1.8
SPT6YGR116W UBP13P38187 747 aa3.8□□□□□ -1.8
SPT6YGR116W DIA4P38705 446 aaPredicted RBP3.8□□□□□ -1.8
SPT6YGR116W UTP9P38882 575 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W GAA1P39012 614 aa3.8□□□□□ -1.8
SPT6YGR116W OAF1P39720 1047 aaPredicted RBP3.8□□□□□ -1.8
SPT6YGR116W UBP5P39944 805 aa3.8□□□□□ -1.8
SPT6YGR116W YJR054WP47114 497 aa3.8□□□□□ -1.8
SPT6YGR116W TRF5P48561 642 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W PGA2P53903 129 aa3.8□□□□□ -1.8
SPT6YGR116W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SPT6YGR116W TLG1Q03322 224 aa3.8□□□□□ -1.8
SPT6YGR116W CDC73Q06697 393 aa3.8□□□□□ -1.8
SPT6YGR116W RPN8Q08723 338 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W YPR202WQ08993 238 aa3.8□□□□□ -1.8
SPT6YGR116W ILV1P00927 576 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W ILS1P09436 1072 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W TUB3P09734 445 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W MSD1P15179 658 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W SEC2P17065 759 aa3.8□□□□□ -1.8
SPT6YGR116W VPS34P22543 875 aa3.8□□□□□ -1.8
SPT6YGR116W ADP1P25371 1049 aa3.8□□□□□ -1.8
SPT6YGR116W ADY2P25613 283 aa3.8□□□□□ -1.8
SPT6YGR116W PRO3P32263 286 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W CSE1P33307 960 aa3.8□□□□□ -1.8
SPT6YGR116W YBR138CP38277 524 aa3.8□□□□□ -1.8
SPT6YGR116W VMA22P38784 181 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms