RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B TMA64Q04600 565 aaKnown RBP1.86□□□□□ -2.11
YGR109W-BYGR109W-B MET6P05694 767 aaKnown RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B HOS4P40480 1083 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B YFL052WP43551 465 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B SNP1Q00916 300 aaPredicted RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B ARG5,6Q01217 863 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B ARO10Q06408 635 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B YKL033W-AQ86ZR7 236 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B SGS1P35187 1447 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B PHO81P17442 1178 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B RRP43P25359 394 aaPredicted RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B GFD2P25370 566 aaKnown RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B ORC2P32833 620 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B RIM4P38741 713 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B HXT16P47185 567 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B NSE3Q05541 303 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B PRP4P20053 465 aaKnown RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B GDT1P38301 280 aaPredicted RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B TDP1P38319 544 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B RSP5P39940 809 aaKnown RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B GID8P40208 455 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B RPT2P40327 437 aaKnown RBP1.85□□□□□ -2.11
YGR109W-BYGR109W-B GYP8P43570 497 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B APC2Q12440 853 aa1.85□□□□□ -2.11
YGR109W-BYGR109W-B RAD16P31244 790 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B NTH1P32356 751 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B HSL7P38274 827 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B MIP6P38760 659 aaKnown RBP1.84□□□□□ -2.11
YGR109W-BYGR109W-B NUP60P39705 539 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B CAF16P43569 289 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B TEX1P53851 422 aaKnown RBP1.84□□□□□ -2.11
YGR109W-BYGR109W-B FCP1Q03254 732 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B IRC13Q08630 104 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B DOP1Q03921 1698 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B PFK2P16862 959 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
YGR109W-BYGR109W-B ADY2P25613 283 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B MTC2P34246 357 aa1.84□□□□□ -2.11
YGR109W-BYGR109W-B PPZ2P33329 710 aa1.84□□□□□ -2.12
YGR109W-BYGR109W-B SAS3P34218 831 aa1.84□□□□□ -2.12
YGR109W-BYGR109W-B MUP3P38734 546 aa1.84□□□□□ -2.12
YGR109W-BYGR109W-B CRP1P38845 465 aaKnown RBP1.84□□□□□ -2.12
YGR109W-BYGR109W-B YMR206WQ03695 313 aa1.84□□□□□ -2.12
YGR109W-BYGR109W-B SFI1Q12369 946 aa1.84□□□□□ -2.12
YGR109W-BYGR109W-B CAN1P04817 590 aa1.84□□□□□ -2.12
YGR109W-BYGR109W-B PHR1P05066 565 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
YGR109W-BYGR109W-B YKL091CP33324 310 aaKnown RBP1.84□□□□□ -2.12
YGR109W-BYGR109W-B UTP9P38882 575 aaKnown RBP1.84□□□□□ -2.12
YGR109W-BYGR109W-B NUG1P40010 520 aaKnown RBP1.84□□□□□ -2.12
YGR109W-BYGR109W-B ESF2P53743 316 aaKnown RBP1.84□□□□□ -2.12
YGR109W-BYGR109W-B HMO1Q03973 246 aaKnown RBP1.84□□□□□ -2.12
YGR109W-BYGR109W-B TRM13Q12383 476 aa1.84□□□□□ -2.12
YGR109W-BYGR109W-B HOM2P13663 365 aaKnown RBP1.83□□□□□ -2.12
YGR109W-BYGR109W-B MSS116P15424 664 aaKnown RBP1.83□□□□□ -2.12
YGR109W-BYGR109W-B PEX1P24004 1043 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B YHR020WP38708 688 aaKnown RBP1.83□□□□□ -2.12
YGR109W-BYGR109W-B PAC2P39937 518 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B NPY1P53164 384 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B UGO1Q03327 502 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B LRS4Q04087 347 aaKnown RBP1.83□□□□□ -2.12
YGR109W-BYGR109W-B YLR125WQ12138 136 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B GPR1Q12361 961 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B MDM12Q92328 271 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B SAC3P46674 1301 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B SPO14P36126 1683 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B HIR1P32479 840 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B RPS0AP32905 252 aaKnown RBP1.83□□□□□ -2.12
YGR109W-BYGR109W-B RMA1P36001 430 aaKnown RBP1.83□□□□□ -2.12
YGR109W-BYGR109W-B GDH3P39708 457 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B AFT2Q08957 416 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B KSS1P14681 368 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B UME6P39001 836 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B FHN1P53279 174 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B YIL002W-AQ3E7Z5 69 aa1.83□□□□□ -2.12
YGR109W-BYGR109W-B MVD1P32377 396 aaKnown RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B APN2P38207 520 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B RFC1P38630 861 aaKnown RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B SPT8P38915 602 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B GPD1Q00055 391 aaKnown RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B SEG1Q04279 960 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B CDC53Q12018 815 aaKnown RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B VPS34P22543 875 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B PRP22P24384 1145 aaKnown RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B YKR018CP36114 725 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B GMH1P36125 273 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B ERT1P38140 529 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B PCL10P53124 433 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B DAK1P54838 584 aaKnown RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B NHX1Q04121 633 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B IRC3Q06683 689 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B ZRT2Q12436 422 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B HOG1P32485 435 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B MAL31P38156 614 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B GLO1P50107 326 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B CGR1P53188 120 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B RPN4Q03465 531 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B YCG1Q06680 1035 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B YRA1Q12159 226 aaKnown RBP1.82□□□□□ -2.12
YGR109W-BYGR109W-B STF1P01098 86 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B BET3P36149 193 aa1.82□□□□□ -2.12
YGR109W-BYGR109W-B LGE1Q02796 332 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms