RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTF1	YGL244W	HES1	P35843	434 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	YKL222C	P35995	705 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	TAF3	Q12297	353 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	GPM3	Q12326	303 aa		11.87	□□□□□ -0.51
RTF1	YGL244W	RAD18	P10862	487 aa		11.86	□□□□□ -0.51
RTF1	YGL244W	VPH2	P32341	215 aa		11.86	□□□□□ -0.51
RTF1	YGL244W	NUP120	P35729	1037 aa		11.86	□□□□□ -0.51
RTF1	YGL244W	ETR1	P38071	380 aa		11.86	□□□□□ -0.51
RTF1	YGL244W	ARG2	P40360	574 aa		11.86	□□□□□ -0.51
RTF1	YGL244W	DPH1	P40487	425 aa	Known RBP	11.86	□□□□□ -0.51
RTF1	YGL244W	GCN20	P43535	752 aa	Known RBP	11.86	□□□□□ -0.51
RTF1	YGL244W	YGL039W	P53183	348 aa	Known RBP	11.86	□□□□□ -0.51
RTF1	YGL244W	CRF1	Q04930	467 aa		11.86	□□□□□ -0.51
RTF1	YGL244W	ADE13	Q05911	482 aa	Known RBP	11.86	□□□□□ -0.51
RTF1	YGL244W	NOC3	Q07896	663 aa	Predicted RBP	11.86	□□□□□ -0.51
RTF1	YGL244W	YAK1	P14680	807 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	URA7	P28274	579 aa	Known RBP	11.85	□□□□□ -0.51
RTF1	YGL244W	IRE1	P32361	1115 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	COT1	P32798	439 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	TMA108	P40462	946 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	YJL107C	P42947	387 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	AVT1	P47082	602 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	ARO80	Q04052	950 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	NCR1	Q12200	1170 aa		11.85	□□□□□ -0.51
RTF1	YGL244W	NOT5	Q12514	560 aa	Predicted RBP	11.85	□□□□□ -0.51
RTF1	YGL244W	URA4	P20051	364 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	SNT1	P25357	1226 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	RRT12	P25381	491 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	SLA2	P33338	968 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	TRM5	P38793	499 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	KEL1	P38853	1164 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	SBE2	P42223	864 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	YJL045W	P47052	634 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	UBP15	P50101	1230 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	IST1	P53843	298 aa	Predicted RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	SVF1	Q05515	481 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	YET3	Q07451	203 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	ADY3	Q07732	790 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	YOR059C	Q08448	450 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	MSB1	P21339	1137 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	CDC48	P25694	835 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	TMT1	P32643	299 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	CUE2	P36075	443 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	YKR078W	P36158	585 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	TSC10	P38342	320 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	KHA1	P40309	873 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	PDS1	P40316	373 aa	Predicted RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	RLP7	P40693	322 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	DIM1	P41819	318 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	YGR016W	P53209	190 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	INP2	Q03824	705 aa		11.84	□□□□□ -0.51
RTF1	YGL244W	BUD22	Q04347	519 aa	Known RBP	11.84	□□□□□ -0.51
RTF1	YGL244W	EST1	P17214	699 aa	Predicted RBP	11.83	□□□□□ -0.52
RTF1	YGL244W	DGR2	P32330	852 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	CBR1	P38626	284 aa	Known RBP	11.83	□□□□□ -0.52
RTF1	YGL244W	LAM1	P38851	1228 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	FRT2	P39734	528 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	YDR476C	Q03362	224 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	THI7	Q05998	598 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	KAP95	Q06142	861 aa	Known RBP	11.83	□□□□□ -0.52
RTF1	YGL244W	BCP1	Q06338	283 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	ATG17	Q06410	417 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	DIA2	Q08496	732 aa	Predicted RBP	11.83	□□□□□ -0.52
RTF1	YGL244W	SLP1	Q12232	587 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	ECM3	Q99252	613 aa		11.83	□□□□□ -0.52
RTF1	YGL244W	TRX1	P22217	103 aa	Known RBP	11.82	□□□□□ -0.52
RTF1	YGL244W	LHS1	P36016	881 aa		11.82	□□□□□ -0.52
RTF1	YGL244W	FTR1	P40088	404 aa		11.82	□□□□□ -0.52
RTF1	YGL244W	MRM2	P53123	320 aa		11.82	□□□□□ -0.52
RTF1	YGL244W	PUS2	P53167	370 aa		11.82	□□□□□ -0.52
RTF1	YGL244W	GUD1	Q07729	489 aa		11.82	□□□□□ -0.52
RTF1	YGL244W	GIS3	Q12418	502 aa		11.82	□□□□□ -0.52
RTF1	YGL244W	YER152C	P10356	443 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	ADE2	P21264	571 aa	Known RBP	11.81	□□□□□ -0.52
RTF1	YGL244W	SLY1	P22213	666 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	RAD14	P28519	371 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	TGL1	P34163	548 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	RRP14	P36080	434 aa	Known RBP	11.81	□□□□□ -0.52
RTF1	YGL244W	TGL4	P36165	910 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	PCM1	P38628	557 aa	Known RBP	11.81	□□□□□ -0.52
RTF1	YGL244W	SAW1	P39735	261 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	STL1	P39932	569 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	NUT1	P53114	1132 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	YGR125W	P53273	1036 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	RTT102	P53330	157 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	SMC5	Q08204	1093 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	DIP2	Q12220	943 aa	Predicted RBP	11.81	□□□□□ -0.52
RTF1	YGL244W	YSC84	P32793	468 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	SIP2	P34164	415 aa	Known RBP	11.81	□□□□□ -0.52
RTF1	YGL244W	ALY2	P47029	1046 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	ROD1	Q02805	837 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	SXM1	Q04175	944 aa	Known RBP	11.81	□□□□□ -0.52
RTF1	YGL244W	SNX3	Q08826	162 aa	Known RBP	11.81	□□□□□ -0.52
RTF1	YGL244W	YPR202W	Q08993	238 aa		11.81	□□□□□ -0.52
RTF1	YGL244W	ENO1	P00924	437 aa	Known RBP	11.8	□□□□□ -0.52
RTF1	YGL244W	TEF1	P02994	458 aa	Known RBP	11.8	□□□□□ -0.52
RTF1	YGL244W	SAM1	P10659	382 aa	Known RBP	11.8	□□□□□ -0.52
RTF1	YGL244W	NAT1	P12945	854 aa	Known RBP	11.8	□□□□□ -0.52
RTF1	YGL244W	COX11	P19516	300 aa	Known RBP	11.8	□□□□□ -0.52
RTF1	YGL244W	BCS1	P32839	456 aa		11.8	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms