RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C RPL40AP0CH08 128 aaKnown RBP4.3□□□□□ -1.72
OTU1YFL044C RPL40BP0CH09 128 aaKnown RBP4.3□□□□□ -1.72
OTU1YFL044C MSD1P15179 658 aaKnown RBP4.3□□□□□ -1.72
OTU1YFL044C PWP2P25635 923 aaKnown RBP4.3□□□□□ -1.72
OTU1YFL044C MSH2P25847 964 aa4.3□□□□□ -1.72
OTU1YFL044C URK1P27515 501 aa4.3□□□□□ -1.72
OTU1YFL044C BUD2P33314 1104 aa4.3□□□□□ -1.72
OTU1YFL044C NDT80P38830 627 aa4.3□□□□□ -1.72
OTU1YFL044C FMP10P40098 244 aa4.3□□□□□ -1.72
OTU1YFL044C ALR2P43553 858 aa4.3□□□□□ -1.72
OTU1YFL044C CIT3P43635 486 aa4.3□□□□□ -1.72
OTU1YFL044C YJL045WP47052 634 aa4.3□□□□□ -1.72
OTU1YFL044C INP52P50942 1183 aa4.3□□□□□ -1.72
OTU1YFL044C MDR1P53258 950 aa4.3□□□□□ -1.72
OTU1YFL044C HDA1P53973 706 aa4.3□□□□□ -1.72
OTU1YFL044C VIP1Q06685 1146 aaKnown RBP4.3□□□□□ -1.72
OTU1YFL044C NTG2Q08214 380 aa4.3□□□□□ -1.72
OTU1YFL044C RIM20Q12033 661 aa4.3□□□□□ -1.72
OTU1YFL044C YER152CP10356 443 aa4.29□□□□□ -1.72
OTU1YFL044C CHS2P14180 963 aa4.29□□□□□ -1.72
OTU1YFL044C MSS51P32335 436 aa4.29□□□□□ -1.72
OTU1YFL044C PRS1P32895 427 aaKnown RBP4.29□□□□□ -1.72
OTU1YFL044C PGM1P33401 570 aaKnown RBP4.29□□□□□ -1.72
OTU1YFL044C BET3P36149 193 aa4.29□□□□□ -1.72
OTU1YFL044C AAP1P37898 856 aaKnown RBP4.29□□□□□ -1.72
OTU1YFL044C SLX1P38324 304 aa4.29□□□□□ -1.72
OTU1YFL044C SIP5P40210 489 aaKnown RBP4.29□□□□□ -1.72
OTU1YFL044C CSM2P40465 213 aa4.29□□□□□ -1.72
OTU1YFL044C OPT1P40897 799 aa4.29□□□□□ -1.72
OTU1YFL044C HUL4P40985 892 aa4.29□□□□□ -1.72
OTU1YFL044C CCT8P47079 568 aaKnown RBP4.29□□□□□ -1.72
OTU1YFL044C UTP8P53276 713 aaKnown RBP4.29□□□□□ -1.72
OTU1YFL044C TPO2P53283 614 aa4.29□□□□□ -1.72
OTU1YFL044C TFC6Q06339 672 aa4.29□□□□□ -1.72
OTU1YFL044C WHI4Q07655 649 aaKnown RBP4.29□□□□□ -1.72
OTU1YFL044C NSI1Q12457 570 aa4.29□□□□□ -1.72
OTU1YFL044C SES1P07284 462 aaKnown RBP4.28□□□□□ -1.72
OTU1YFL044C TPM1P17536 199 aaKnown RBP4.28□□□□□ -1.72
OTU1YFL044C MSB1P21339 1137 aaKnown RBP4.28□□□□□ -1.72
OTU1YFL044C UBC1P21734 215 aaKnown RBP4.28□□□□□ -1.72
OTU1YFL044C YSC84P32793 468 aa4.28□□□□□ -1.72
OTU1YFL044C KAE1P36132 386 aa4.28□□□□□ -1.72
OTU1YFL044C BUD16P39988 312 aa4.28□□□□□ -1.72
OTU1YFL044C YEL025CP39991 1188 aa4.28□□□□□ -1.72
OTU1YFL044C RPN3P40016 523 aaKnown RBP4.28□□□□□ -1.72
OTU1YFL044C YTA12P40341 825 aa4.28□□□□□ -1.72
OTU1YFL044C TNA1P53322 534 aa4.28□□□□□ -1.72
OTU1YFL044C HOS3Q02959 697 aaKnown RBP4.28□□□□□ -1.72
OTU1YFL044C ARP6Q12509 438 aa4.28□□□□□ -1.72
OTU1YFL044C RAD50P12753 1312 aa4.27□□□□□ -1.73
OTU1YFL044C RPL11AP0C0W9 174 aaKnown RBP4.27□□□□□ -1.73
OTU1YFL044C RNR3P21672 869 aaKnown RBP4.27□□□□□ -1.73
OTU1YFL044C YHL012WP38709 493 aa4.27□□□□□ -1.73
OTU1YFL044C CCC2P38995 1004 aa4.27□□□□□ -1.73
OTU1YFL044C CCT3P39077 534 aaKnown RBP4.27□□□□□ -1.73
OTU1YFL044C HSV2P50079 448 aaPredicted RBP4.27□□□□□ -1.73
OTU1YFL044C PSP2P50109 593 aaKnown RBP4.27□□□□□ -1.73
OTU1YFL044C ASE1P50275 885 aa4.27□□□□□ -1.73
OTU1YFL044C TFB2Q02939 513 aa4.27□□□□□ -1.73
OTU1YFL044C PHM6Q05637 104 aa4.27□□□□□ -1.73
OTU1YFL044C NKP2Q06162 153 aa4.27□□□□□ -1.73
OTU1YFL044C YLR455WQ06188 304 aa4.27□□□□□ -1.73
OTU1YFL044C YLR122CQ12312 125 aa4.27□□□□□ -1.73
OTU1YFL044C YVC1Q12324 675 aa4.27□□□□□ -1.73
OTU1YFL044C RPL11BQ3E757 174 aaPredicted RBP4.27□□□□□ -1.73
OTU1YFL044C YOR111WQ99210 232 aa4.27□□□□□ -1.73
OTU1YFL044C UTP20P35194 2493 aaKnown RBP4.27□□□□□ -1.73
OTU1YFL044C MBR1P23493 339 aa4.26□□□□□ -1.73
OTU1YFL044C SRO9P25567 434 aaKnown RBP4.26□□□□□ -1.73
OTU1YFL044C PEP3P27801 918 aa4.26□□□□□ -1.73
OTU1YFL044C AAR2P32357 355 aaPredicted RBP4.26□□□□□ -1.73
OTU1YFL044C SFP1P32432 683 aa4.26□□□□□ -1.73
OTU1YFL044C CDC11P32458 415 aa4.26□□□□□ -1.73
OTU1YFL044C APN2P38207 520 aa4.26□□□□□ -1.73
OTU1YFL044C CCZ1P38273 704 aa4.26□□□□□ -1.73
OTU1YFL044C SUL1P38359 859 aa4.26□□□□□ -1.73
OTU1YFL044C MMF1P40185 145 aaKnown RBP4.26□□□□□ -1.73
OTU1YFL044C MUK1Q02866 612 aa4.26□□□□□ -1.73
OTU1YFL044C PRP8P33334 2413 aaKnown RBP4.25□□□□□ -1.73
OTU1YFL044C PGK1P00560 416 aaKnown RBP4.25□□□□□ -1.73
OTU1YFL044C VAS1P07806 1104 aaKnown RBP4.25□□□□□ -1.73
OTU1YFL044C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
OTU1YFL044C PPZ1P26570 692 aa4.25□□□□□ -1.73
OTU1YFL044C PEX6P33760 1030 aa4.25□□□□□ -1.73
OTU1YFL044C UBP11P36026 717 aa4.25□□□□□ -1.73
OTU1YFL044C MRPL7P36519 292 aa4.25□□□□□ -1.73
OTU1YFL044C YAP1801P38856 637 aa4.25□□□□□ -1.73
OTU1YFL044C GDH3P39708 457 aa4.25□□□□□ -1.73
OTU1YFL044C MAL11P53048 616 aa4.25□□□□□ -1.73
OTU1YFL044C YGR130CP53278 816 aa4.25□□□□□ -1.73
OTU1YFL044C ZPR1P53303 486 aaKnown RBP4.25□□□□□ -1.73
OTU1YFL044C CNM67P53865 581 aaKnown RBP4.25□□□□□ -1.73
OTU1YFL044C ORC4P54791 529 aa4.25□□□□□ -1.73
OTU1YFL044C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
OTU1YFL044C LCD1Q04377 747 aa4.25□□□□□ -1.73
OTU1YFL044C PIG1Q06216 648 aa4.25□□□□□ -1.73
OTU1YFL044C ACM1Q08981 209 aa4.25□□□□□ -1.73
OTU1YFL044C HBN1Q96VH4 193 aa4.25□□□□□ -1.73
OTU1YFL044C TOP3P13099 656 aa4.24□□□□□ -1.73
OTU1YFL044C DBP2P24783 546 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms