RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C MSS1P32559 526 aaPredicted RBP3.54□□□□□ -1.84
MSH4YFL003C RPP1P38786 293 aa3.54□□□□□ -1.84
MSH4YFL003C PLB1P39105 664 aa3.54□□□□□ -1.84
MSH4YFL003C ERP2P39704 215 aa3.54□□□□□ -1.84
MSH4YFL003C ASK10P48361 1146 aa3.54□□□□□ -1.84
MSH4YFL003C ORC4P54791 529 aa3.54□□□□□ -1.84
MSH4YFL003C VPS30Q02948 557 aa3.54□□□□□ -1.84
MSH4YFL003C YML131WQ03102 365 aa3.54□□□□□ -1.84
MSH4YFL003C NOP12Q08208 459 aaKnown RBP3.54□□□□□ -1.84
MSH4YFL003C DNF1P32660 1571 aa3.53□□□□□ -1.84
MSH4YFL003C HIR3P47171 1648 aa3.53□□□□□ -1.84
MSH4YFL003C APL2P36000 726 aaPredicted RBP3.53□□□□□ -1.84
MSH4YFL003C SWD1P39706 426 aa3.53□□□□□ -1.84
MSH4YFL003C STL1P39932 569 aa3.53□□□□□ -1.84
MSH4YFL003C SCS2P40075 244 aaKnown RBP3.53□□□□□ -1.84
MSH4YFL003C HOS4P40480 1083 aa3.53□□□□□ -1.84
MSH4YFL003C BIT61P47041 543 aa3.53□□□□□ -1.84
MSH4YFL003C RNR4P49723 345 aaKnown RBP3.53□□□□□ -1.84
MSH4YFL003C PSP2P50109 593 aaKnown RBP3.53□□□□□ -1.84
MSH4YFL003C EXG2P52911 562 aa3.53□□□□□ -1.84
MSH4YFL003C RRT6P53117 311 aaPredicted RBP3.53□□□□□ -1.84
MSH4YFL003C CDA2Q06703 312 aa3.53□□□□□ -1.84
MSH4YFL003C DFG16Q99234 619 aa3.53□□□□□ -1.84
MSH4YFL003C YCF1P39109 1515 aaKnown RBP3.53□□□□□ -1.84
MSH4YFL003C THI80P35202 319 aa3.53□□□□□ -1.84
MSH4YFL003C CRG1P38892 291 aaRIP-Chip data3.53□□□□□ -1.84not detected
MSH4YFL003C PZF1P39933 429 aa3.53□□□□□ -1.84
MSH4YFL003C BAP3P41815 604 aa3.53□□□□□ -1.84
MSH4YFL003C MTL1P53214 551 aa3.53□□□□□ -1.84
MSH4YFL003C TEP1P53916 434 aa3.53□□□□□ -1.84
MSH4YFL003C SSP2Q08646 371 aa3.53□□□□□ -1.84
MSH4YFL003C LTE1P07866 1435 aa3.52□□□□□ -1.85
MSH4YFL003C IRC20Q06554 1556 aa3.52□□□□□ -1.85
MSH4YFL003C PHO3P24031 467 aa3.52□□□□□ -1.85
MSH4YFL003C PET127P32606 800 aa3.52□□□□□ -1.85
MSH4YFL003C YMR210WQ03649 449 aa3.52□□□□□ -1.85
MSH4YFL003C COG4Q06096 861 aa3.52□□□□□ -1.85
MSH4YFL003C PYC1P11154 1178 aaKnown RBP3.52□□□□□ -1.85
MSH4YFL003C BEM3P32873 1128 aa3.52□□□□□ -1.85
MSH4YFL003C SEG2P34250 1132 aa3.52□□□□□ -1.85
MSH4YFL003C APN2P38207 520 aa3.52□□□□□ -1.85
MSH4YFL003C PEF1P53238 335 aa3.52□□□□□ -1.85
MSH4YFL003C CPR6P53691 371 aaKnown RBP3.52□□□□□ -1.85
MSH4YFL003C GPD1Q00055 391 aaKnown RBP3.52□□□□□ -1.85
MSH4YFL003C YLR224WQ05947 369 aa3.52□□□□□ -1.85
MSH4YFL003C PEX19Q07418 342 aa3.52□□□□□ -1.85
MSH4YFL003C VHS3Q08438 674 aa3.52□□□□□ -1.85
MSH4YFL003C YPL277CQ08989 487 aa3.52□□□□□ -1.85
MSH4YFL003C DBP10Q12389 995 aaKnown RBP3.52□□□□□ -1.85
MSH4YFL003C YOL087CQ99247 1116 aa3.52□□□□□ -1.85
MSH4YFL003C BNI1P41832 1953 aa3.52□□□□□ -1.85
MSH4YFL003C FRD1P32614 470 aaKnown RBP3.51□□□□□ -1.85
MSH4YFL003C SNO2P53823 222 aa3.51□□□□□ -1.85
MSH4YFL003C MDG1P53885 366 aa3.51□□□□□ -1.85
MSH4YFL003C HIM1Q06674 414 aa3.51□□□□□ -1.85
MSH4YFL003C ACK1Q07622 623 aaPredicted RBP3.51□□□□□ -1.85
MSH4YFL003C ARP7Q12406 477 aa3.51□□□□□ -1.85
MSH4YFL003C ECM3Q99252 613 aa3.51□□□□□ -1.85
MSH4YFL003C MET5P47169 1442 aa3.51□□□□□ -1.85
MSH4YFL003C MSM1P22438 575 aa3.51□□□□□ -1.85
MSH4YFL003C ARG1P22768 420 aa3.51□□□□□ -1.85
MSH4YFL003C YBR053CP38235 358 aa3.51□□□□□ -1.85
MSH4YFL003C STT3P39007 718 aaKnown RBP3.51□□□□□ -1.85
MSH4YFL003C DUN1P39009 513 aa3.51□□□□□ -1.85
MSH4YFL003C FTR1P40088 404 aa3.51□□□□□ -1.85
MSH4YFL003C MCM21Q06675 368 aa3.51□□□□□ -1.85
MSH4YFL003C TGL1P34163 548 aa3.5□□□□□ -1.85
MSH4YFL003C POL12P38121 705 aaPredicted RBP3.5□□□□□ -1.85
MSH4YFL003C YBR259WP38338 688 aa3.5□□□□□ -1.85
MSH4YFL003C ECM1P39715 212 aa3.5□□□□□ -1.85
MSH4YFL003C PUG1P40100 303 aa3.5□□□□□ -1.85
MSH4YFL003C PRM2P40534 656 aa3.5□□□□□ -1.85
MSH4YFL003C TAF4P50105 388 aa3.5□□□□□ -1.85
MSH4YFL003C THI22Q06490 572 aa3.5□□□□□ -1.85
MSH4YFL003C PUS1Q12211 544 aaKnown RBP3.5□□□□□ -1.85
MSH4YFL003C ATG2P53855 1592 aa3.5□□□□□ -1.85
MSH4YFL003C RPS13P05756 151 aaKnown RBP3.5□□□□□ -1.85
MSH4YFL003C YBR138CP38277 524 aa3.5□□□□□ -1.85
MSH4YFL003C UBS1P38290 277 aa3.5□□□□□ -1.85
MSH4YFL003C EHT1P38295 451 aa3.5□□□□□ -1.85
MSH4YFL003C RIM4P38741 713 aa3.5□□□□□ -1.85
MSH4YFL003C HRB1P38922 454 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
MSH4YFL003C VPS27P40343 622 aaKnown RBP3.5□□□□□ -1.85
MSH4YFL003C SAP185P40856 1058 aa3.5□□□□□ -1.85
MSH4YFL003C ACS1Q01574 713 aa3.5□□□□□ -1.85
MSH4YFL003C PKH1Q03407 766 aa3.5□□□□□ -1.85
MSH4YFL003C TRM8Q12009 286 aa3.5□□□□□ -1.85
MSH4YFL003C SWM1Q12379 170 aa3.5□□□□□ -1.85
MSH4YFL003C TRM11Q12463 433 aa3.5□□□□□ -1.85
MSH4YFL003C URA3P03962 267 aa3.49□□□□□ -1.85
MSH4YFL003C FMO1P38866 432 aa3.49□□□□□ -1.85
MSH4YFL003C NOC2P39744 710 aaKnown RBP3.49□□□□□ -1.85
MSH4YFL003C VAS1P07806 1104 aaKnown RBP3.49□□□□□ -1.85
MSH4YFL003C CBP3P21560 335 aa3.49□□□□□ -1.85
MSH4YFL003C REC102Q02721 264 aa3.49□□□□□ -1.85
MSH4YFL003C TIM50Q02776 476 aa3.49□□□□□ -1.85
MSH4YFL003C NSE5Q03718 556 aa3.49□□□□□ -1.85
MSH4YFL003C ARR3Q06598 404 aa3.49□□□□□ -1.85
MSH4YFL003C RXT3Q07458 294 aa3.49□□□□□ -1.85
MSH4YFL003C RPA190P10964 1664 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms