RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	VIP1	Q06685	1146 aa	Known RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	ISA1	Q07821	250 aa	Predicted RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	VHS3	Q08438	674 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	DBP10	Q12389	995 aa	Known RBP	4.58	□□□□□ -1.68
SPB4	YFL002C	VPS5	Q92331	675 aa		4.58	□□□□□ -1.68
SPB4	YFL002C	AAC3	P18238	307 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	CLB4	P24871	460 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	TFC3	P34111	1160 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	LRG1	P35688	1017 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	BCD1	P38772	366 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	PZF1	P39933	429 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	PSF2	P40359	213 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	FAF1	P40546	346 aa	Predicted RBP	4.57	□□□□□ -1.68
SPB4	YFL002C	CCT8	P47079	568 aa	Known RBP	4.57	□□□□□ -1.68
SPB4	YFL002C	YNR071C	P53757	342 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	GSF2	Q04697	403 aa	Known RBP	4.57	□□□□□ -1.68
SPB4	YFL002C	ASM4	Q05166	528 aa		4.57	□□□□□ -1.68
SPB4	YFL002C	IWR1	Q07532	353 aa	Predicted RBP	4.57	□□□□□ -1.68
SPB4	YFL002C	POL3	P15436	1097 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	IME1	P21190	360 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	SIR1	P21691	654 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	PET127	P32606	800 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	NUP120	P35729	1037 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	PTC7	P38797	343 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	YER010C	P40011	234 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	VHR1	P40522	640 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	GTS1	P40956	396 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	YFL066C	P43538	392 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	CTF18	P49956	741 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	YNR014W	P53719	212 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	NSE5	Q03718	556 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	MUS81	Q04149	632 aa	Predicted RBP	4.56	□□□□□ -1.68
SPB4	YFL002C	TRM8	Q12009	286 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	SPE1	P08432	466 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	GUK1	P15454	187 aa	Known RBP	4.56	□□□□□ -1.68
SPB4	YFL002C	CWH43	P25618	953 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	CMK1	P27466	446 aa	Known RBP	4.56	□□□□□ -1.68
SPB4	YFL002C	RKM3	P38222	552 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	NPR3	P38742	1146 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	YEL068C	P39977	110 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	RIC1	P40395	1056 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	SAP4	P53036	818 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	YBP2	P53169	641 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	RBG2	P53295	368 aa	Known RBP	4.56	□□□□□ -1.68
SPB4	YFL002C	CBK1	P53894	756 aa		4.56	□□□□□ -1.68
SPB4	YFL002C	SEM1	O94742	89 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	FRS1	P15624	595 aa	Known RBP	4.55	□□□□□ -1.68
SPB4	YFL002C	YBR138C	P38277	524 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	IFA38	P38286	347 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	AKR1	P39010	764 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	MND2	P40577	368 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	PFA3	P42836	336 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	TAF4	P50105	388 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	PEF1	P53238	335 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	RCR2	Q03446	210 aa	Known RBP	4.55	□□□□□ -1.68
SPB4	YFL002C	ARA2	Q04212	335 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	CSR1	Q06705	408 aa	Known RBP	4.55	□□□□□ -1.68
SPB4	YFL002C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SPB4	YFL002C	YPR053C	Q6Q5F3	151 aa		4.55	□□□□□ -1.68
SPB4	YFL002C	PYC1	P11154	1178 aa	Known RBP	4.54	□□□□□ -1.68
SPB4	YFL002C	CBF2	P32504	956 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	TOA1	P32773	286 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	MRPL36	P36531	177 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	YHR033W	P38690	423 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	UME6	P39001	836 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	CCT3	P39077	534 aa	Known RBP	4.54	□□□□□ -1.68
SPB4	YFL002C	RRT6	P53117	311 aa	Predicted RBP	4.54	□□□□□ -1.68
SPB4	YFL002C	YAP1802	P53309	568 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	TDA9	Q04545	1251 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	AAD4	Q07747	329 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	GRC3	Q07845	632 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SPB4	YFL002C	SCM3	Q12334	223 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	ATG11	Q12527	1178 aa		4.54	□□□□□ -1.68
SPB4	YFL002C	FUM1	P08417	488 aa	Known RBP	4.53	□□□□□ -1.68
SPB4	YFL002C	CDC16	P09798	840 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	YPT7	P32939	208 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	UBS1	P38290	277 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	BUD8	P41698	603 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	PXA1	P41909	870 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	PRP31	P49704	494 aa	Predicted RBP	4.53	□□□□□ -1.68
SPB4	YFL002C	ARG5,6	Q01217	863 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	REC102	Q02721	264 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	SSY1	Q03770	852 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	UPC2	Q12151	913 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	HOS1	Q12214	470 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	MET8	P15807	274 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SPB4	YFL002C	ADE2	P21264	571 aa	Known RBP	4.53	□□□□□ -1.68
SPB4	YFL002C	OPI1	P21957	404 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	STE14	P32584	239 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	FRD1	P32614	470 aa	Known RBP	4.53	□□□□□ -1.68
SPB4	YFL002C	URM1	P40554	99 aa	Predicted RBP	4.53	□□□□□ -1.68
SPB4	YFL002C	ASI2	P53895	289 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	PPN1	Q04119	674 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	YLR287C	Q05881	355 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	CRD1	Q07560	283 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	WHI4	Q07655	649 aa	Known RBP	4.53	□□□□□ -1.68
SPB4	YFL002C	TAH18	Q12181	623 aa		4.53	□□□□□ -1.68
SPB4	YFL002C	HOM3	P10869	527 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms