RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W YMR124WP39523 943 aaKnown RBP7.46□□□□□ -1.22
PDA1YER178W YER189WP40104 122 aa7.46□□□□□ -1.22
PDA1YER178W YTA12P40341 825 aa7.46□□□□□ -1.22
PDA1YER178W MOB1P40484 314 aa7.46□□□□□ -1.22
PDA1YER178W PRK1P40494 810 aa7.46□□□□□ -1.22
PDA1YER178W CDC1P40986 491 aa7.46□□□□□ -1.22
PDA1YER178W YNL144CP53907 740 aa7.46□□□□□ -1.22
PDA1YER178W CEG1Q01159 459 aaPredicted RBP7.46□□□□□ -1.22
PDA1YER178W DIG1Q03063 452 aaKnown RBP7.46□□□□□ -1.22
PDA1YER178W HRD3Q05787 833 aa7.46□□□□□ -1.22
PDA1YER178W RRD2Q12461 358 aa7.46□□□□□ -1.22
PDA1YER178W COQ8P27697 501 aa7.45□□□□□ -1.22
PDA1YER178W KDX1P36005 433 aa7.45□□□□□ -1.22
PDA1YER178W DUG2P38149 878 aa7.45□□□□□ -1.22
PDA1YER178W SHE3P38272 425 aaKnown RBP7.45□□□□□ -1.22
PDA1YER178W NMD3P38861 518 aaKnown RBP7.45□□□□□ -1.22
PDA1YER178W RAD55P38953 406 aa7.45□□□□□ -1.22
PDA1YER178W HXT8P40886 569 aa7.45□□□□□ -1.22
PDA1YER178W STU2P46675 888 aa7.45□□□□□ -1.22
PDA1YER178W GUF1P46943 645 aa7.45□□□□□ -1.22
PDA1YER178W PFD1P46988 109 aa7.45□□□□□ -1.22
PDA1YER178W GCN5Q03330 439 aa7.45□□□□□ -1.22
PDA1YER178W MDM38Q08179 573 aa7.45□□□□□ -1.22
PDA1YER178W YOR059CQ08448 450 aaKnown RBP7.45□□□□□ -1.22
PDA1YER178W NBP2Q12163 236 aa7.45□□□□□ -1.22
PDA1YER178W FAB1P34756 2278 aa7.44□□□□□ -1.22
PDA1YER178W MTF2P10849 440 aa7.44□□□□□ -1.22
PDA1YER178W MET4P32389 672 aa7.44□□□□□ -1.22
PDA1YER178W YBR225WP38321 900 aa7.44□□□□□ -1.22
PDA1YER178W AVT2P39981 480 aa7.44□□□□□ -1.22
PDA1YER178W SEC9P40357 651 aa7.44□□□□□ -1.22
PDA1YER178W ASG1P40467 964 aa7.44□□□□□ -1.22
PDA1YER178W UTP8P53276 713 aaKnown RBP7.44□□□□□ -1.22
PDA1YER178W YDR344CQ05510 147 aa7.44□□□□□ -1.22
PDA1YER178W YOR387CQ08910 206 aa7.44□□□□□ -1.22
PDA1YER178W NDJ1Q12366 352 aa7.44□□□□□ -1.22
PDA1YER178W HMG2P12684 1045 aa7.43□□□□□ -1.22
PDA1YER178W KGD2P19262 463 aaPredicted RBP7.43□□□□□ -1.22
PDA1YER178W PEX34P25584 144 aa7.43□□□□□ -1.22
PDA1YER178W DAL1P32375 460 aa7.43□□□□□ -1.22
PDA1YER178W EFM4P40516 257 aa7.43□□□□□ -1.22
PDA1YER178W YAP5P40574 245 aa7.43□□□□□ -1.22
PDA1YER178W OSW7P43611 510 aa7.43□□□□□ -1.22
PDA1YER178W ELP3Q02908 557 aaKnown RBP7.43□□□□□ -1.22
PDA1YER178W PIR3Q03180 325 aa7.43□□□□□ -1.22
PDA1YER178W SOV1Q04748 898 aa7.43□□□□□ -1.22
PDA1YER178W JIP3O13555 125 aa7.42□□□□□ -1.22
PDA1YER178W SIR1P21691 654 aa7.42□□□□□ -1.22
PDA1YER178W STE11P23561 717 aa7.42□□□□□ -1.22
PDA1YER178W PPH22P23595 377 aa7.42□□□□□ -1.22
PDA1YER178W YBR053CP38235 358 aa7.42□□□□□ -1.22
PDA1YER178W SNZ3P43545 298 aa7.42□□□□□ -1.22
PDA1YER178W VPS25P47142 202 aa7.42□□□□□ -1.22
PDA1YER178W YGR111WP53265 400 aa7.42□□□□□ -1.22
PDA1YER178W SNZ2P53824 298 aa7.42□□□□□ -1.22
PDA1YER178W TAF10Q12030 206 aa7.42□□□□□ -1.22
PDA1YER178W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
PDA1YER178W SEC23P15303 768 aaKnown RBP7.41□□□□□ -1.22
PDA1YER178W BET2P20133 325 aa7.41□□□□□ -1.22
PDA1YER178W RAM1P22007 431 aa7.41□□□□□ -1.22
PDA1YER178W CAP1P28495 268 aaKnown RBP7.41□□□□□ -1.22
PDA1YER178W HXT1P32465 570 aa7.41□□□□□ -1.22
PDA1YER178W SRB2P34162 210 aa7.41□□□□□ -1.22
PDA1YER178W HSL7P38274 827 aa7.41□□□□□ -1.22
PDA1YER178W TDA3P38758 523 aa7.41□□□□□ -1.22
PDA1YER178W SMC2P38989 1170 aaKnown RBP7.41□□□□□ -1.22
PDA1YER178W TMN3P40071 706 aa7.41□□□□□ -1.22
PDA1YER178W TMA108P40462 946 aa7.41□□□□□ -1.22
PDA1YER178W TMN2Q04562 672 aa7.41□□□□□ -1.22
PDA1YER178W VPS38Q05919 439 aa7.41□□□□□ -1.22
PDA1YER178W SPE3Q12074 293 aaKnown RBP7.41□□□□□ -1.22
PDA1YER178W HSF1P10961 833 aa7.4□□□□□ -1.22
PDA1YER178W CYC8P14922 966 aa7.4□□□□□ -1.22
PDA1YER178W PUT4P15380 627 aa7.4□□□□□ -1.22
PDA1YER178W VMA4P22203 233 aaKnown RBP7.4□□□□□ -1.22
PDA1YER178W IMG2P25642 146 aaPredicted RBP7.4□□□□□ -1.22
PDA1YER178W AIM26P32858 118 aa7.4□□□□□ -1.22
PDA1YER178W COY1P34237 679 aa7.4□□□□□ -1.22
PDA1YER178W TSA1P34760 196 aaKnown RBP7.4□□□□□ -1.22
PDA1YER178W TCD1P38756 429 aa7.4□□□□□ -1.22
PDA1YER178W BRO1P48582 844 aa7.4□□□□□ -1.22
PDA1YER178W YGR021WP53212 290 aa7.4□□□□□ -1.22
PDA1YER178W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22 RIP-Chip
PDA1YER178W LEE1Q02799 301 aaKnown RBP7.4□□□□□ -1.22
PDA1YER178W SYH1Q02875 849 aaKnown RBP7.4□□□□□ -1.22
PDA1YER178W INA17Q02888 182 aa7.4□□□□□ -1.22
PDA1YER178W SPG3Q04398 127 aaPredicted RBP7.4□□□□□ -1.22
PDA1YER178W TAF9Q05027 157 aa7.4□□□□□ -1.22
PDA1YER178W YPR148CQ06523 435 aa7.4□□□□□ -1.22
PDA1YER178W AIM39Q08223 395 aa7.4□□□□□ -1.22
PDA1YER178W LPX1Q12405 387 aaKnown RBP7.4□□□□□ -1.22
PDA1YER178W PAB1P04147 577 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
PDA1YER178W RAD10P06838 210 aa7.39□□□□□ -1.23
PDA1YER178W HXT3P32466 567 aaKnown RBP7.39□□□□□ -1.23
PDA1YER178W HSP78P33416 811 aa7.39□□□□□ -1.23
PDA1YER178W MFT1P33441 392 aaKnown RBP7.39□□□□□ -1.23
PDA1YER178W STO1P34160 861 aaKnown RBP7.39□□□□□ -1.23
PDA1YER178W NUP60P39705 539 aa7.39□□□□□ -1.23
PDA1YER178W PSP1P50896 841 aaKnown RBP7.39□□□□□ -1.23
PDA1YER178W HOP2P53187 214 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms