RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	VHS3	Q08438	674 aa		4.1	□□□□□ -1.75
PMI40	YER003C	SWM1	Q12379	170 aa		4.1	□□□□□ -1.75
PMI40	YER003C	YLR358C	O13565	187 aa		4.09	□□□□□ -1.75
PMI40	YER003C	YLR415C	O13578	112 aa		4.09	□□□□□ -1.75
PMI40	YER003C	PYC1	P11154	1178 aa	Known RBP	4.09	□□□□□ -1.75
PMI40	YER003C	YCR015C	P25616	317 aa		4.09	□□□□□ -1.75
PMI40	YER003C	TOD6	P34219	525 aa		4.09	□□□□□ -1.75
PMI40	YER003C	SHM2	P37291	469 aa	Known RBP	4.09	□□□□□ -1.75
PMI40	YER003C	SCS2	P40075	244 aa	Known RBP	4.09	□□□□□ -1.75
PMI40	YER003C	GCV2	P49095	1034 aa		4.09	□□□□□ -1.75
PMI40	YER003C	PRP31	P49704	494 aa	Predicted RBP	4.09	□□□□□ -1.75
PMI40	YER003C	NCS6	P53088	359 aa		4.09	□□□□□ -1.75
PMI40	YER003C	PKH1	Q03407	766 aa		4.09	□□□□□ -1.75
PMI40	YER003C	NSE5	Q03718	556 aa		4.09	□□□□□ -1.75
PMI40	YER003C	YAP6	Q03935	383 aa		4.09	□□□□□ -1.75
PMI40	YER003C	CIA1	Q05583	330 aa		4.09	□□□□□ -1.75
PMI40	YER003C	MCM21	Q06675	368 aa		4.09	□□□□□ -1.75
PMI40	YER003C	OPY2	Q06810	360 aa		4.09	□□□□□ -1.75
PMI40	YER003C	STP4	Q07351	490 aa		4.09	□□□□□ -1.75
PMI40	YER003C	SSP2	Q08646	371 aa		4.09	□□□□□ -1.75
PMI40	YER003C	RRI2	Q12348	645 aa		4.09	□□□□□ -1.75
PMI40	YER003C	VAS1	P07806	1104 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	TUB3	P09734	445 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	ADH4	P10127	382 aa		4.08	□□□□□ -1.76
PMI40	YER003C	HSC82	P15108	705 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	FRS1	P15624	595 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	IME1	P21190	360 aa		4.08	□□□□□ -1.76
PMI40	YER003C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
PMI40	YER003C	ADE2	P21264	571 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	SEC21	P32074	935 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	BEM3	P32873	1128 aa		4.08	□□□□□ -1.76
PMI40	YER003C	APL2	P36000	726 aa	Predicted RBP	4.08	□□□□□ -1.76
PMI40	YER003C	APT2	P36973	181 aa		4.08	□□□□□ -1.76
PMI40	YER003C	SIC1	P38634	284 aa		4.08	□□□□□ -1.76
PMI40	YER003C	NOC2	P39744	710 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	MOT3	P54785	490 aa	Known RBP	4.08	□□□□□ -1.76
PMI40	YER003C	VPS5	Q92331	675 aa		4.08	□□□□□ -1.76
PMI40	YER003C	SSM4	P40318	1319 aa		4.07	□□□□□ -1.76
PMI40	YER003C	PRP4	P20053	465 aa	Known RBP	4.07	□□□□□ -1.76
PMI40	YER003C	STE11	P23561	717 aa		4.07	□□□□□ -1.76
PMI40	YER003C	GFD2	P25370	566 aa	Known RBP	4.07	□□□□□ -1.76
PMI40	YER003C	YPT7	P32939	208 aa		4.07	□□□□□ -1.76
PMI40	YER003C	XRS2	P33301	854 aa		4.07	□□□□□ -1.76
PMI40	YER003C	THI80	P35202	319 aa		4.07	□□□□□ -1.76
PMI40	YER003C	APM3	P38153	483 aa		4.07	□□□□□ -1.76
PMI40	YER003C	PSY4	P38193	441 aa		4.07	□□□□□ -1.76
PMI40	YER003C	MSS4	P38994	779 aa		4.07	□□□□□ -1.76
PMI40	YER003C	SWD1	P39706	426 aa		4.07	□□□□□ -1.76
PMI40	YER003C	PXA1	P41909	870 aa		4.07	□□□□□ -1.76
PMI40	YER003C	ERR3	P42222	437 aa		4.07	□□□□□ -1.76
PMI40	YER003C	MAD3	P47074	515 aa		4.07	□□□□□ -1.76
PMI40	YER003C	TAF4	P50105	388 aa		4.07	□□□□□ -1.76
PMI40	YER003C	GTR1	Q00582	310 aa		4.07	□□□□□ -1.76
PMI40	YER003C	HMO1	Q03973	246 aa	Known RBP	4.07	□□□□□ -1.76
PMI40	YER003C	PPN1	Q04119	674 aa		4.07	□□□□□ -1.76
PMI40	YER003C	TRI1	Q05024	226 aa		4.07	□□□□□ -1.76
PMI40	YER003C	EIS1	Q05050	843 aa	Known RBP	4.07	□□□□□ -1.76
PMI40	YER003C	YLR224W	Q05947	369 aa		4.07	□□□□□ -1.76
PMI40	YER003C	NEW1	Q08972	1196 aa	Known RBP	4.07	□□□□□ -1.76
PMI40	YER003C	RER1	P25560	188 aa		4.06	□□□□□ -1.76
PMI40	YER003C	MFT1	P33441	392 aa	Known RBP	4.06	□□□□□ -1.76
PMI40	YER003C	YLF2	P38746	405 aa		4.06	□□□□□ -1.76
PMI40	YER003C	PPE1	P38796	400 aa		4.06	□□□□□ -1.76
PMI40	YER003C	SPC72	P39723	622 aa		4.06	□□□□□ -1.76
PMI40	YER003C	RAD26	P40352	1085 aa		4.06	□□□□□ -1.76
PMI40	YER003C	MAD2	P40958	196 aa		4.06	□□□□□ -1.76
PMI40	YER003C	BUD8	P41698	603 aa		4.06	□□□□□ -1.76
PMI40	YER003C	PEX19	Q07418	342 aa		4.06	□□□□□ -1.76
PMI40	YER003C	DIN7	Q12086	430 aa		4.06	□□□□□ -1.76
PMI40	YER003C	RTK1	Q12100	620 aa	Predicted RBP	4.06	□□□□□ -1.76
PMI40	YER003C	NPC2	Q12408	173 aa		4.06	□□□□□ -1.76
PMI40	YER003C	GFA1	P14742	717 aa	Known RBP	4.05	□□□□□ -1.76
PMI40	YER003C	CBP3	P21560	335 aa		4.05	□□□□□ -1.76
PMI40	YER003C	CWH43	P25618	953 aa		4.05	□□□□□ -1.76
PMI40	YER003C	MCM10	P32354	571 aa		4.05	□□□□□ -1.76
PMI40	YER003C	RRN3	P36070	627 aa		4.05	□□□□□ -1.76
PMI40	YER003C	YHR112C	P38716	378 aa		4.05	□□□□□ -1.76
PMI40	YER003C	CCT3	P39077	534 aa	Known RBP	4.05	□□□□□ -1.76
PMI40	YER003C	PLB1	P39105	664 aa		4.05	□□□□□ -1.76
PMI40	YER003C	UBA2	P52488	636 aa		4.05	□□□□□ -1.76
PMI40	YER003C	MNT2	P53059	558 aa		4.05	□□□□□ -1.76
PMI40	YER003C	YRB30	P53107	440 aa	Predicted RBP	4.05	□□□□□ -1.76
PMI40	YER003C	PEF1	P53238	335 aa		4.05	□□□□□ -1.76
PMI40	YER003C	CPR6	P53691	371 aa	Known RBP	4.05	□□□□□ -1.76
PMI40	YER003C	RCR2	Q03446	210 aa	Known RBP	4.05	□□□□□ -1.76
PMI40	YER003C	VBA4	Q04602	768 aa	Known RBP	4.05	□□□□□ -1.76
PMI40	YER003C	SGO1	Q08490	590 aa		4.05	□□□□□ -1.76
PMI40	YER003C	TRM11	Q12463	433 aa		4.05	□□□□□ -1.76
PMI40	YER003C	RTP1	Q12751	981 aa		4.05	□□□□□ -1.76
PMI40	YER003C	YOL087C	Q99247	1116 aa		4.05	□□□□□ -1.76
PMI40	YER003C	ERG20	P08524	352 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	MTF2	P10849	440 aa		4.04	□□□□□ -1.76
PMI40	YER003C	MCM3	P24279	971 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	PRP22	P24384	1145 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	CHS3	P29465	1165 aa		4.04	□□□□□ -1.76
PMI40	YER003C	YHR033W	P38690	423 aa		4.04	□□□□□ -1.76
PMI40	YER003C	STT3	P39007	718 aa	Known RBP	4.04	□□□□□ -1.76
PMI40	YER003C	IMA5	P40884	581 aa		4.04	□□□□□ -1.76
PMI40	YER003C	SMK1	P41808	388 aa		4.04	□□□□□ -1.76
PMI40	YER003C	BIT61	P47041	543 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms