RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W IRC3Q06683 689 aa1.46□□□□□ -2.18
BFR2YDR299W VPS36Q06696 566 aa1.46□□□□□ -2.18
BFR2YDR299W GEP3Q08622 556 aa1.46□□□□□ -2.18
BFR2YDR299W CDC53Q12018 815 aaKnown RBP1.46□□□□□ -2.18
BFR2YDR299W AI5_ALPHAQ9ZZX1 630 aa1.46□□□□□ -2.18
BFR2YDR299W RPS9BP05755 195 aaKnown RBP1.45□□□□□ -2.18
BFR2YDR299W GSY1P23337 708 aa1.45□□□□□ -2.18
BFR2YDR299W AAD3P25612 363 aa1.45□□□□□ -2.18
BFR2YDR299W ELF1P36053 145 aa1.45□□□□□ -2.18
BFR2YDR299W RIM4P38741 713 aa1.45□□□□□ -2.18
BFR2YDR299W DSS1P39112 969 aa1.45□□□□□ -2.18
BFR2YDR299W GDH3P39708 457 aa1.45□□□□□ -2.18
BFR2YDR299W NOP7P53261 605 aaKnown RBP1.45□□□□□ -2.18
BFR2YDR299W ATP23P53722 227 aa1.45□□□□□ -2.18
BFR2YDR299W ARP4P80428 489 aa1.45□□□□□ -2.18
BFR2YDR299W LEE1Q02799 301 aaKnown RBP1.45□□□□□ -2.18
BFR2YDR299W TRS23Q03784 219 aa1.45□□□□□ -2.18
BFR2YDR299W UFO1Q04511 668 aa1.45□□□□□ -2.18
BFR2YDR299W ISA1Q07821 250 aaPredicted RBP1.45□□□□□ -2.18
BFR2YDR299W CDC9P04819 755 aa1.44□□□□□ -2.18
BFR2YDR299W MIH1P23748 554 aa1.44□□□□□ -2.18
BFR2YDR299W HOG1P32485 435 aa1.44□□□□□ -2.18
BFR2YDR299W SEC6P32844 805 aa1.44□□□□□ -2.18
BFR2YDR299W COS111P38308 924 aa1.44□□□□□ -2.18
BFR2YDR299W CAF16P43569 289 aa1.44□□□□□ -2.18
BFR2YDR299W PIP2P52960 996 aa1.44□□□□□ -2.18
BFR2YDR299W YPL068CQ02749 293 aa1.44□□□□□ -2.18
BFR2YDR299W ARG7Q04728 441 aa1.44□□□□□ -2.18
BFR2YDR299W POM34Q12445 299 aa1.44□□□□□ -2.18
BFR2YDR299W ERR1P0CX10 437 aa1.44□□□□□ -2.18
BFR2YDR299W ERR2P0CX11 437 aa1.44□□□□□ -2.18
BFR2YDR299W KIN82P25341 720 aa1.44□□□□□ -2.18
BFR2YDR299W MRPL9P31334 269 aa1.44□□□□□ -2.18
BFR2YDR299W BEM3P32873 1128 aa1.44□□□□□ -2.18
BFR2YDR299W BRE5P53741 515 aaKnown RBP1.44□□□□□ -2.18
BFR2YDR299W DAK1P54838 584 aaKnown RBP1.44□□□□□ -2.18
BFR2YDR299W ERG13P54839 491 aaKnown RBP1.44□□□□□ -2.18
BFR2YDR299W GPD1Q00055 391 aaKnown RBP1.44□□□□□ -2.18
BFR2YDR299W YFT2Q06676 274 aa1.44□□□□□ -2.18
BFR2YDR299W STE4P18851 423 aa1.43□□□□□ -2.18
BFR2YDR299W TSR4P25040 408 aa1.43□□□□□ -2.18
BFR2YDR299W EUG1P32474 517 aa1.43□□□□□ -2.18
BFR2YDR299W MSS1P32559 526 aaPredicted RBP1.43□□□□□ -2.18
BFR2YDR299W MNN4P36044 1178 aa1.43□□□□□ -2.18
BFR2YDR299W YHR202WP38887 602 aa1.43□□□□□ -2.18
BFR2YDR299W IRC8P47046 822 aa1.43□□□□□ -2.18
BFR2YDR299W MAL11P53048 616 aa1.43□□□□□ -2.18
BFR2YDR299W YGL117WP53133 265 aa1.43□□□□□ -2.18
BFR2YDR299W SCW4P53334 386 aaKnown RBP1.43□□□□□ -2.18
BFR2YDR299W SNF12P53628 566 aa1.43□□□□□ -2.18
BFR2YDR299W VHS3Q08438 674 aa1.43□□□□□ -2.18
BFR2YDR299W FRE7Q12333 620 aa1.43□□□□□ -2.18
BFR2YDR299W YOR131CQ12486 218 aa1.43□□□□□ -2.18
BFR2YDR299W SRD1P09007 221 aa1.42□□□□□ -2.18
BFR2YDR299W HEM1P09950 548 aaPredicted RBP1.42□□□□□ -2.18
BFR2YDR299W TUP1P16649 713 aa1.42□□□□□ -2.18
BFR2YDR299W ECM32P32644 1121 aaKnown RBP1.42□□□□□ -2.18
BFR2YDR299W YEL1P34225 687 aa1.42□□□□□ -2.18
BFR2YDR299W YKR075CP36155 307 aa1.42□□□□□ -2.18
BFR2YDR299W AKL1P38080 1108 aaKnown RBP1.42□□□□□ -2.18
BFR2YDR299W CHZ1P40019 153 aaPredicted RBP1.42□□□□□ -2.18
BFR2YDR299W THI6P41835 540 aa1.42□□□□□ -2.18
BFR2YDR299W SNO3P43544 222 aa1.42□□□□□ -2.18
BFR2YDR299W YJL043WP47053 257 aa1.42□□□□□ -2.18
BFR2YDR299W CPR8P53728 308 aa1.42□□□□□ -2.18
BFR2YDR299W VBA4Q04602 768 aaKnown RBP1.42□□□□□ -2.18
BFR2YDR299W NSE3Q05541 303 aa1.42□□□□□ -2.18
BFR2YDR299W IZH3Q07959 543 aa1.42□□□□□ -2.18
BFR2YDR299W PRS5Q12265 496 aaKnown RBP1.42□□□□□ -2.18
BFR2YDR299W MDM12Q92328 271 aa1.42□□□□□ -2.18
BFR2YDR299W FRS1P15624 595 aaKnown RBP1.41□□□□□ -2.18
BFR2YDR299W STI1P15705 589 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
BFR2YDR299W MEF1P25039 761 aa1.41□□□□□ -2.18
BFR2YDR299W PIH1P38768 344 aa1.41□□□□□ -2.18
BFR2YDR299W SSZ1P38788 538 aaKnown RBP1.41□□□□□ -2.18
BFR2YDR299W JHD1P40034 492 aa1.41□□□□□ -2.18
BFR2YDR299W MNT3P40549 630 aa1.41□□□□□ -2.18
BFR2YDR299W BIT61P47041 543 aa1.41□□□□□ -2.18
BFR2YDR299W AIM14P53109 570 aa1.41□□□□□ -2.18
BFR2YDR299W ENT2Q05785 613 aa1.41□□□□□ -2.18
BFR2YDR299W ZPS1Q12512 249 aa1.41□□□□□ -2.18
BFR2YDR299W RPL7AP05737 244 aaKnown RBP1.4□□□□□ -2.18
BFR2YDR299W HMG1P12683 1054 aa1.4□□□□□ -2.18
BFR2YDR299W URE2P23202 354 aaKnown RBP1.4□□□□□ -2.18
BFR2YDR299W PRP22P24384 1145 aaKnown RBP1.4□□□□□ -2.18
BFR2YDR299W IMG2P25642 146 aaPredicted RBP1.4□□□□□ -2.18
BFR2YDR299W PET127P32606 800 aa1.4□□□□□ -2.18
BFR2YDR299W TIM23P32897 222 aa1.4□□□□□ -2.18
BFR2YDR299W YJR039WP47107 1121 aa1.4□□□□□ -2.18
BFR2YDR299W YIP4P53093 235 aa1.4□□□□□ -2.18
BFR2YDR299W MFM1Q02783 413 aa1.4□□□□□ -2.18
BFR2YDR299W NEW1Q08972 1196 aaKnown RBP1.4□□□□□ -2.18
BFR2YDR299W RPL7BQ12213 244 aaKnown RBP1.4□□□□□ -2.18
BFR2YDR299W SEC3P33332 1336 aaKnown RBP1.4□□□□□ -2.19
BFR2YDR299W CPA2P03965 1118 aaKnown RBP1.4□□□□□ -2.19
BFR2YDR299W LEU2P04173 364 aaPredicted RBP1.4□□□□□ -2.19
BFR2YDR299W PMA2P19657 947 aa1.4□□□□□ -2.19
BFR2YDR299W RPC34P32910 317 aa1.4□□□□□ -2.19
BFR2YDR299W APD1P38281 316 aa1.4□□□□□ -2.19
BFR2YDR299W PPE1P38796 400 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 88.8 ms