RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C PTA1Q01329 785 aaPredicted RBP2.27□□□□□ -2.05
SWI5YDR146C MLH3Q12083 715 aa2.27□□□□□ -2.05
SWI5YDR146C PNS1Q12412 539 aa2.27□□□□□ -2.05
SWI5YDR146C POM34Q12445 299 aa2.27□□□□□ -2.05
SWI5YDR146C ERG20P08524 352 aaKnown RBP2.27□□□□□ -2.05
SWI5YDR146C THR1P17423 357 aaKnown RBP2.27□□□□□ -2.05
SWI5YDR146C FEN2P25621 512 aaKnown RBP2.27□□□□□ -2.05
SWI5YDR146C MVD1P32377 396 aaKnown RBP2.27□□□□□ -2.05
SWI5YDR146C YKR075CP36155 307 aa2.27□□□□□ -2.05
SWI5YDR146C SFB3P38810 929 aa2.27□□□□□ -2.05
SWI5YDR146C DAS1P47005 663 aa2.27□□□□□ -2.05
SWI5YDR146C YMR210WQ03649 449 aa2.27□□□□□ -2.05
SWI5YDR146C NSE5Q03718 556 aa2.27□□□□□ -2.05
SWI5YDR146C TRE2Q08693 809 aa2.27□□□□□ -2.05
SWI5YDR146C AEP2P22136 580 aa2.26□□□□□ -2.05
SWI5YDR146C PRP28P23394 588 aa2.26□□□□□ -2.05
SWI5YDR146C PRE4P30657 266 aa2.26□□□□□ -2.05
SWI5YDR146C HEM12P32347 362 aaPredicted RBP2.26□□□□□ -2.05
SWI5YDR146C PLC1P32383 869 aa2.26□□□□□ -2.05
SWI5YDR146C HXT4P32467 576 aa2.26□□□□□ -2.05
SWI5YDR146C CDS1P38221 457 aa2.26□□□□□ -2.05
SWI5YDR146C SDS3P40505 327 aa2.26□□□□□ -2.05
SWI5YDR146C STB4P50104 949 aa2.26□□□□□ -2.05
SWI5YDR146C COX18P53239 316 aa2.26□□□□□ -2.05
SWI5YDR146C YAP1802P53309 568 aa2.26□□□□□ -2.05
SWI5YDR146C SKY1Q03656 742 aa2.26□□□□□ -2.05
SWI5YDR146C ACF2Q12168 779 aa2.26□□□□□ -2.05
SWI5YDR146C RMP1Q12530 201 aa2.26□□□□□ -2.05
SWI5YDR146C HIS7P33734 552 aaKnown RBP2.26□□□□□ -2.05
SWI5YDR146C SET3P36124 751 aa2.26□□□□□ -2.05
SWI5YDR146C REV7P38927 245 aa2.26□□□□□ -2.05
SWI5YDR146C CCT7P42943 550 aaKnown RBP2.26□□□□□ -2.05
SWI5YDR146C IRC5P43610 853 aa2.26□□□□□ -2.05
SWI5YDR146C YDL183CP48569 320 aa2.26□□□□□ -2.05
SWI5YDR146C RFX1P48743 811 aa2.26□□□□□ -2.05
SWI5YDR146C FOL1P53848 824 aa2.26□□□□□ -2.05
SWI5YDR146C TGL2P54857 326 aa2.26□□□□□ -2.05
SWI5YDR146C TMN2Q04562 672 aa2.26□□□□□ -2.05
SWI5YDR146C VBA4Q04602 768 aaKnown RBP2.26□□□□□ -2.05
SWI5YDR146C YFT2Q06676 274 aa2.26□□□□□ -2.05
SWI5YDR146C MCH5Q08777 521 aa2.26□□□□□ -2.05
SWI5YDR146C YPR027CQ12079 277 aa2.26□□□□□ -2.05
SWI5YDR146C CHS5Q12114 671 aaKnown RBP2.26□□□□□ -2.05
SWI5YDR146C CLF1Q12309 687 aaPredicted RBP2.26□□□□□ -2.05
SWI5YDR146C KIN82P25341 720 aa2.25□□□□□ -2.05
SWI5YDR146C PCL5P38794 229 aa2.25□□□□□ -2.05
SWI5YDR146C PXA1P41909 870 aa2.25□□□□□ -2.05
SWI5YDR146C TAF4P50105 388 aa2.25□□□□□ -2.05
SWI5YDR146C SPO1P53541 631 aa2.25□□□□□ -2.05
SWI5YDR146C YMR206WQ03695 313 aa2.25□□□□□ -2.05
SWI5YDR146C HLR1Q04429 423 aa2.25□□□□□ -2.05
SWI5YDR146C DIA2Q08496 732 aaPredicted RBP2.25□□□□□ -2.05
SWI5YDR146C TAF3Q12297 353 aa2.25□□□□□ -2.05
SWI5YDR146C ZRT2Q12436 422 aa2.25□□□□□ -2.05
SWI5YDR146C CTP1P38152 299 aa2.24□□□□□ -2.05
SWI5YDR146C COS111P38308 924 aa2.24□□□□□ -2.05
SWI5YDR146C CRG1P38892 291 aaRIP-Chip data2.24□□□□□ -2.05not detected
SWI5YDR146C FTR1P40088 404 aa2.24□□□□□ -2.05
SWI5YDR146C PIG2P40187 538 aa2.24□□□□□ -2.05
SWI5YDR146C YIL077CP40508 320 aa2.24□□□□□ -2.05
SWI5YDR146C PRM2P40534 656 aa2.24□□□□□ -2.05
SWI5YDR146C MPS3P47069 682 aa2.24□□□□□ -2.05
SWI5YDR146C BFA1P47113 574 aa2.24□□□□□ -2.05
SWI5YDR146C RNR4P49723 345 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C SNF12P53628 566 aa2.24□□□□□ -2.05
SWI5YDR146C SSL2Q00578 843 aa2.24□□□□□ -2.05
SWI5YDR146C FDC1Q03034 503 aa2.24□□□□□ -2.05
SWI5YDR146C PPN1Q04119 674 aa2.24□□□□□ -2.05
SWI5YDR146C IZH3Q07959 543 aa2.24□□□□□ -2.05
SWI5YDR146C COX11P19516 300 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C PRP22P24384 1145 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C TFC4P33339 1025 aa2.24□□□□□ -2.05
SWI5YDR146C TOM20P35180 183 aa2.24□□□□□ -2.05
SWI5YDR146C MTH1P35198 433 aa2.24□□□□□ -2.05
SWI5YDR146C SRP68P38687 599 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C DUN1P39009 513 aa2.24□□□□□ -2.05
SWI5YDR146C KHA1P40309 873 aa2.24□□□□□ -2.05
SWI5YDR146C NDC80P40460 691 aa2.24□□□□□ -2.05
SWI5YDR146C ENP2P48234 707 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C PEX14P53112 341 aa2.24□□□□□ -2.05
SWI5YDR146C PEX8P53248 589 aa2.24□□□□□ -2.05
SWI5YDR146C ATG4P53867 494 aa2.24□□□□□ -2.05
SWI5YDR146C YNL034WP53963 612 aa2.24□□□□□ -2.05
SWI5YDR146C YNL018CP53976 612 aa2.24□□□□□ -2.05
SWI5YDR146C MTD1Q02046 320 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C HBT1Q07653 1046 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C NGL1Q08213 363 aaKnown RBP2.24□□□□□ -2.05
SWI5YDR146C PEX15Q08215 383 aa2.24□□□□□ -2.05
SWI5YDR146C SLX4Q12098 748 aa2.24□□□□□ -2.05
SWI5YDR146C USV1Q12132 391 aa2.24□□□□□ -2.05
SWI5YDR146C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
SWI5YDR146C TUP1P16649 713 aa2.23□□□□□ -2.05
SWI5YDR146C QRI1P43123 477 aaKnown RBP2.23□□□□□ -2.05
SWI5YDR146C PUS4P48567 403 aaKnown RBP2.23□□□□□ -2.05
SWI5YDR146C PEF1P53238 335 aa2.23□□□□□ -2.05
SWI5YDR146C GND2P53319 492 aa2.23□□□□□ -2.05
SWI5YDR146C TIM44Q01852 431 aa2.23□□□□□ -2.05
SWI5YDR146C RPS9BP05755 195 aaKnown RBP2.23□□□□□ -2.05
SWI5YDR146C HMG2P12684 1045 aa2.23□□□□□ -2.05
SWI5YDR146C YHR097CP38809 366 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms