RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C MDM20Q12387 796 aaKnown RBP2.26□□□□□ -2.05
SSS1YDR086C LAM4P38800 1345 aa2.25□□□□□ -2.05
SSS1YDR086C ERG20P08524 352 aaKnown RBP2.25□□□□□ -2.05
SSS1YDR086C NUP1P20676 1076 aa2.25□□□□□ -2.05
SSS1YDR086C SEC15P22224 910 aa2.25□□□□□ -2.05
SSS1YDR086C MBR1P23493 339 aa2.25□□□□□ -2.05
SSS1YDR086C FEN2P25621 512 aaKnown RBP2.25□□□□□ -2.05
SSS1YDR086C YMC1P32331 307 aa2.25□□□□□ -2.05
SSS1YDR086C DOT6P40059 670 aaKnown RBP2.25□□□□□ -2.05
SSS1YDR086C KHA1P40309 873 aa2.25□□□□□ -2.05
SSS1YDR086C PSA1P41940 361 aaKnown RBP2.25□□□□□ -2.05
SSS1YDR086C TAX4P47030 604 aa2.25□□□□□ -2.05
SSS1YDR086C ORC1P54784 914 aaPredicted RBP2.25□□□□□ -2.05
SSS1YDR086C DAK1P54838 584 aaKnown RBP2.25□□□□□ -2.05
SSS1YDR086C YDR179W-AQ03983 463 aa2.25□□□□□ -2.05
SSS1YDR086C HFD1Q04458 532 aa2.25□□□□□ -2.05
SSS1YDR086C UFO1Q04511 668 aa2.25□□□□□ -2.05
SSS1YDR086C POM34Q12445 299 aa2.25□□□□□ -2.05
SSS1YDR086C SRD1P09007 221 aa2.24□□□□□ -2.05
SSS1YDR086C KIN82P25341 720 aa2.24□□□□□ -2.05
SSS1YDR086C HOT13P36078 116 aa2.24□□□□□ -2.05
SSS1YDR086C AKL1P38080 1108 aaKnown RBP2.24□□□□□ -2.05
SSS1YDR086C SSZ1P38788 538 aaKnown RBP2.24□□□□□ -2.05
SSS1YDR086C YHR097CP38809 366 aaKnown RBP2.24□□□□□ -2.05
SSS1YDR086C THI6P41835 540 aa2.24□□□□□ -2.05
SSS1YDR086C YJR039WP47107 1121 aa2.24□□□□□ -2.05
SSS1YDR086C RFX1P48743 811 aa2.24□□□□□ -2.05
SSS1YDR086C NMA2P53204 395 aa2.24□□□□□ -2.05
SSS1YDR086C CPR8P53728 308 aa2.24□□□□□ -2.05
SSS1YDR086C GPD1Q00055 391 aaKnown RBP2.24□□□□□ -2.05
SSS1YDR086C YPL068CQ02749 293 aa2.24□□□□□ -2.05
SSS1YDR086C PET127P32606 800 aa2.23□□□□□ -2.05
SSS1YDR086C YPT7P32939 208 aa2.23□□□□□ -2.05
SSS1YDR086C COS111P38308 924 aa2.23□□□□□ -2.05
SSS1YDR086C YIL077CP40508 320 aa2.23□□□□□ -2.05
SSS1YDR086C BPL1P48445 690 aaPredicted RBP2.23□□□□□ -2.05
SSS1YDR086C YGL117WP53133 265 aa2.23□□□□□ -2.05
SSS1YDR086C DIP5P53388 608 aa2.23□□□□□ -2.05
SSS1YDR086C BRE5P53741 515 aaKnown RBP2.23□□□□□ -2.05
SSS1YDR086C STP1Q00947 519 aa2.23□□□□□ -2.05
SSS1YDR086C UGO1Q03327 502 aa2.23□□□□□ -2.05
SSS1YDR086C ARG7Q04728 441 aa2.23□□□□□ -2.05
SSS1YDR086C YFT2Q06676 274 aa2.23□□□□□ -2.05
SSS1YDR086C YOL098CQ12496 1037 aa2.23□□□□□ -2.05
SSS1YDR086C PRP22P24384 1145 aaKnown RBP2.22□□□□□ -2.05
SSS1YDR086C TSR4P25040 408 aa2.22□□□□□ -2.05
SSS1YDR086C MSS1P32559 526 aaPredicted RBP2.22□□□□□ -2.05
SSS1YDR086C SRP40P32583 406 aaPredicted RBP2.22□□□□□ -2.05
SSS1YDR086C YKL091CP33324 310 aaKnown RBP2.22□□□□□ -2.05
SSS1YDR086C MNN4P36044 1178 aa2.22□□□□□ -2.05
SSS1YDR086C PBP2P38151 413 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SSS1YDR086C MAL31P38156 614 aa2.22□□□□□ -2.05
SSS1YDR086C PIH1P38768 344 aa2.22□□□□□ -2.05
SSS1YDR086C BIT61P47041 543 aa2.22□□□□□ -2.05
SSS1YDR086C SNF12P53628 566 aa2.22□□□□□ -2.05
SSS1YDR086C RPN4Q03465 531 aa2.22□□□□□ -2.05
SSS1YDR086C CEF1Q03654 590 aaPredicted RBP2.22□□□□□ -2.05
SSS1YDR086C ISA1Q07821 250 aaPredicted RBP2.22□□□□□ -2.05
SSS1YDR086C IZH3Q07959 543 aa2.22□□□□□ -2.05
SSS1YDR086C VHS3Q08438 674 aa2.22□□□□□ -2.05
SSS1YDR086C CIR2Q08822 631 aa2.22□□□□□ -2.05
SSS1YDR086C YLR125WQ12138 136 aa2.22□□□□□ -2.05
SSS1YDR086C YMR084WA2P2R3 262 aa2.21□□□□□ -2.06
SSS1YDR086C HMG1P12683 1054 aa2.21□□□□□ -2.06
SSS1YDR086C FRS1P15624 595 aaKnown RBP2.21□□□□□ -2.06
SSS1YDR086C TUP1P16649 713 aa2.21□□□□□ -2.06
SSS1YDR086C PMA2P19657 947 aa2.21□□□□□ -2.06
SSS1YDR086C EUG1P32474 517 aa2.21□□□□□ -2.06
SSS1YDR086C PEX6P33760 1030 aa2.21□□□□□ -2.06
SSS1YDR086C APD1P38281 316 aa2.21□□□□□ -2.06
SSS1YDR086C SPC97P38863 823 aa2.21□□□□□ -2.06
SSS1YDR086C YHR202WP38887 602 aa2.21□□□□□ -2.06
SSS1YDR086C BEM4P39011 633 aa2.21□□□□□ -2.06
SSS1YDR086C NUP82P40368 713 aa2.21□□□□□ -2.06
SSS1YDR086C AIM14P53109 570 aa2.21□□□□□ -2.06
SSS1YDR086C VBA4Q04602 768 aaKnown RBP2.21□□□□□ -2.06
SSS1YDR086C ATG33Q06485 197 aa2.21□□□□□ -2.06
SSS1YDR086C VPS36Q06696 566 aa2.21□□□□□ -2.06
SSS1YDR086C AI5_ALPHAQ9ZZX1 630 aa2.21□□□□□ -2.06
SSS1YDR086C RPS9BP05755 195 aaKnown RBP2.2□□□□□ -2.06
SSS1YDR086C AAD3P25612 363 aa2.2□□□□□ -2.06
SSS1YDR086C MSH2P25847 964 aa2.2□□□□□ -2.06
SSS1YDR086C BEM3P32873 1128 aa2.2□□□□□ -2.06
SSS1YDR086C ELF1P36053 145 aa2.2□□□□□ -2.06
SSS1YDR086C YKR075CP36155 307 aa2.2□□□□□ -2.06
SSS1YDR086C RIM4P38741 713 aa2.2□□□□□ -2.06
SSS1YDR086C SPO1P53541 631 aa2.2□□□□□ -2.06
SSS1YDR086C PPN1Q04119 674 aa2.2□□□□□ -2.06
SSS1YDR086C DCS2Q12123 353 aa2.2□□□□□ -2.06
SSS1YDR086C GIN4Q12263 1142 aa2.2□□□□□ -2.06
SSS1YDR086C ZPS1Q12512 249 aa2.2□□□□□ -2.06
SSS1YDR086C LEU2P04173 364 aaPredicted RBP2.19□□□□□ -2.06
SSS1YDR086C RPL7AP05737 244 aaKnown RBP2.19□□□□□ -2.06
SSS1YDR086C PHO8P11491 566 aa2.19□□□□□ -2.06
SSS1YDR086C STE4P18851 423 aa2.19□□□□□ -2.06
SSS1YDR086C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SSS1YDR086C PCL2P25693 308 aa2.19□□□□□ -2.06
SSS1YDR086C RGT1P32862 1170 aa2.19□□□□□ -2.06
SSS1YDR086C RPC34P32910 317 aa2.19□□□□□ -2.06
SSS1YDR086C PCM1P38628 557 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms