RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B BRE5P53741 515 aaKnown RBP2.58□□□□□ -2
HTL1YCR020W-B YSH1Q06224 779 aaPredicted RBP2.58□□□□□ -2
HTL1YCR020W-B BMS1Q08965 1183 aaKnown RBP2.58□□□□□ -2
HTL1YCR020W-B RKI1Q12189 258 aa2.58□□□□□ -2
HTL1YCR020W-B TPK2P06245 380 aa2.57□□□□□ -2
HTL1YCR020W-B SRD1P09007 221 aa2.57□□□□□ -2
HTL1YCR020W-B MEF1P25039 761 aa2.57□□□□□ -2
HTL1YCR020W-B NTH1P32356 751 aa2.57□□□□□ -2
HTL1YCR020W-B ELF1P36053 145 aa2.57□□□□□ -2
HTL1YCR020W-B COS111P38308 924 aa2.57□□□□□ -2
HTL1YCR020W-B YHR202WP38887 602 aa2.57□□□□□ -2
HTL1YCR020W-B NGL2Q03264 515 aaKnown RBP2.57□□□□□ -2
HTL1YCR020W-B HFD1Q04458 532 aa2.57□□□□□ -2
HTL1YCR020W-B CIR2Q08822 631 aa2.57□□□□□ -2
HTL1YCR020W-B POM34Q12445 299 aa2.57□□□□□ -2
HTL1YCR020W-B RPS9BP05755 195 aaKnown RBP2.56□□□□□ -2
HTL1YCR020W-B ERG20P08524 352 aaKnown RBP2.56□□□□□ -2
HTL1YCR020W-B AAD3P25612 363 aa2.56□□□□□ -2
HTL1YCR020W-B YUR1P26725 428 aa2.56□□□□□ -2
HTL1YCR020W-B SEC6P32844 805 aa2.56□□□□□ -2
HTL1YCR020W-B YKL091CP33324 310 aaKnown RBP2.56□□□□□ -2
HTL1YCR020W-B HOT13P36078 116 aa2.56□□□□□ -2
HTL1YCR020W-B NNF1P47149 201 aa2.56□□□□□ -2
HTL1YCR020W-B GPD1Q00055 391 aaKnown RBP2.56□□□□□ -2
HTL1YCR020W-B STP1Q00947 519 aa2.56□□□□□ -2
HTL1YCR020W-B YDR179W-AQ03983 463 aa2.56□□□□□ -2
HTL1YCR020W-B YFT2Q06676 274 aa2.56□□□□□ -2
HTL1YCR020W-B VPS36Q06696 566 aa2.56□□□□□ -2
HTL1YCR020W-B VHS3Q08438 674 aa2.56□□□□□ -2
HTL1YCR020W-B AI5_ALPHAQ9ZZX1 630 aa2.56□□□□□ -2
HTL1YCR020W-B AKL1P38080 1108 aaKnown RBP2.55□□□□□ -2
HTL1YCR020W-B SSZ1P38788 538 aaKnown RBP2.55□□□□□ -2
HTL1YCR020W-B BPL1P48445 690 aaPredicted RBP2.55□□□□□ -2
HTL1YCR020W-B TRS23Q03784 219 aa2.55□□□□□ -2
HTL1YCR020W-B UFO1Q04511 668 aa2.55□□□□□ -2
HTL1YCR020W-B ATG33Q06485 197 aa2.55□□□□□ -2
HTL1YCR020W-B YOL098CQ12496 1037 aa2.55□□□□□ -2
HTL1YCR020W-B HMG1P12683 1054 aa2.54□□□□□ -2
HTL1YCR020W-B KIN82P25341 720 aa2.54□□□□□ -2
HTL1YCR020W-B MSS1P32559 526 aaPredicted RBP2.54□□□□□ -2
HTL1YCR020W-B CCT5P40413 562 aaKnown RBP2.54□□□□□ -2
HTL1YCR020W-B TDA9Q04545 1251 aa2.54□□□□□ -2
HTL1YCR020W-B ARG7Q04728 441 aa2.54□□□□□ -2
HTL1YCR020W-B ORM2Q06144 216 aa2.54□□□□□ -2
HTL1YCR020W-B GIN4Q12263 1142 aa2.54□□□□□ -2
HTL1YCR020W-B FRS1P15624 595 aaKnown RBP2.53□□□□□ -2
HTL1YCR020W-B MBR1P23493 339 aa2.53□□□□□ -2
HTL1YCR020W-B PEX6P33760 1030 aa2.53□□□□□ -2
HTL1YCR020W-B YKR075CP36155 307 aa2.53□□□□□ -2
HTL1YCR020W-B PBP2P38151 413 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
HTL1YCR020W-B RIM4P38741 713 aa2.53□□□□□ -2
HTL1YCR020W-B NUP82P40368 713 aa2.53□□□□□ -2
HTL1YCR020W-B ULP2P40537 1034 aaPredicted RBP2.53□□□□□ -2
HTL1YCR020W-B BIT61P47041 543 aa2.53□□□□□ -2
HTL1YCR020W-B SNF12P53628 566 aa2.53□□□□□ -2
HTL1YCR020W-B VBA4Q04602 768 aaKnown RBP2.53□□□□□ -2
HTL1YCR020W-B GEP3Q08622 556 aa2.53□□□□□ -2
HTL1YCR020W-B MRPL9P31334 269 aa2.52□□□□□ -2.01
HTL1YCR020W-B THI4P32318 326 aa2.52□□□□□ -2.01
HTL1YCR020W-B NUG1P40010 520 aaKnown RBP2.52□□□□□ -2.01
HTL1YCR020W-B PSA1P41940 361 aaKnown RBP2.52□□□□□ -2.01
HTL1YCR020W-B STB2P46679 850 aa2.52□□□□□ -2.01
HTL1YCR020W-B YJR039WP47107 1121 aa2.52□□□□□ -2.01
HTL1YCR020W-B PIP2P52960 996 aa2.52□□□□□ -2.01
HTL1YCR020W-B YGL117WP53133 265 aa2.52□□□□□ -2.01
HTL1YCR020W-B ATP23P53722 227 aa2.52□□□□□ -2.01
HTL1YCR020W-B DAK1P54838 584 aaKnown RBP2.52□□□□□ -2.01
HTL1YCR020W-B IZH3Q07959 543 aa2.52□□□□□ -2.01
HTL1YCR020W-B DCS2Q12123 353 aa2.52□□□□□ -2.01
HTL1YCR020W-B PHO8P11491 566 aa2.51□□□□□ -2.01
HTL1YCR020W-B STE4P18851 423 aa2.51□□□□□ -2.01
HTL1YCR020W-B SFL1P20134 766 aa2.51□□□□□ -2.01
HTL1YCR020W-B IMG2P25642 146 aaPredicted RBP2.51□□□□□ -2.01
HTL1YCR020W-B PCL2P25693 308 aa2.51□□□□□ -2.01
HTL1YCR020W-B PET127P32606 800 aa2.51□□□□□ -2.01
HTL1YCR020W-B PCM1P38628 557 aaKnown RBP2.51□□□□□ -2.01
HTL1YCR020W-B THI6P41835 540 aa2.51□□□□□ -2.01
HTL1YCR020W-B ATG36P46983 293 aa2.51□□□□□ -2.01
HTL1YCR020W-B BFA1P47113 574 aa2.51□□□□□ -2.01
HTL1YCR020W-B RPN4Q03465 531 aa2.51□□□□□ -2.01
HTL1YCR020W-B YMR210WQ03649 449 aa2.51□□□□□ -2.01
HTL1YCR020W-B YLR125WQ12138 136 aa2.51□□□□□ -2.01
HTL1YCR020W-B MSH2P25847 964 aa2.5□□□□□ -2.01
HTL1YCR020W-B PIH1P38768 344 aa2.5□□□□□ -2.01
HTL1YCR020W-B PPE1P38796 400 aa2.5□□□□□ -2.01
HTL1YCR020W-B TMN3P40071 706 aa2.5□□□□□ -2.01
HTL1YCR020W-B CPR8P53728 308 aa2.5□□□□□ -2.01
HTL1YCR020W-B FRE7Q12333 620 aa2.5□□□□□ -2.01
HTL1YCR020W-B ZPS1Q12512 249 aa2.5□□□□□ -2.01
HTL1YCR020W-B PRP22P24384 1145 aaKnown RBP2.49□□□□□ -2.01
HTL1YCR020W-B BEM3P32873 1128 aa2.49□□□□□ -2.01
HTL1YCR020W-B YPT7P32939 208 aa2.49□□□□□ -2.01
HTL1YCR020W-B YEL1P34225 687 aa2.49□□□□□ -2.01
HTL1YCR020W-B MAL31P38156 614 aa2.49□□□□□ -2.01
HTL1YCR020W-B MEP2P41948 499 aa2.49□□□□□ -2.01
HTL1YCR020W-B MFM1Q02783 413 aa2.49□□□□□ -2.01
HTL1YCR020W-B UGO1Q03327 502 aa2.49□□□□□ -2.01
HTL1YCR020W-B RCR2Q03446 210 aaKnown RBP2.49□□□□□ -2.01
HTL1YCR020W-B COG8Q04632 607 aa2.49□□□□□ -2.01
HTL1YCR020W-B YLR407WQ06070 228 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms