RNA–Protein interactions for RNA: YCL004W

PGS1, Transcript of Phosphatidylglycerolphosphate synthase, yeast

Gene PGS1, Length 1,566 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGS1	YCL004W	NHX1	Q04121	633 aa		4.12	□□□□□ -1.75
PGS1	YCL004W	YDR286C	Q05530	114 aa		4.12	□□□□□ -1.75
PGS1	YCL004W	YLR287C	Q05881	355 aa		4.12	□□□□□ -1.75
PGS1	YCL004W	YPL191C	Q08930	360 aa		4.12	□□□□□ -1.75
PGS1	YCL004W	RIB2	Q12362	591 aa	Known RBP	4.12	□□□□□ -1.75
PGS1	YCL004W	ARP7	Q12406	477 aa		4.12	□□□□□ -1.75
PGS1	YCL004W	RVB2	Q12464	471 aa	Known RBP	4.12	□□□□□ -1.75
PGS1	YCL004W	RPL11A	P0C0W9	174 aa	Known RBP	4.11	□□□□□ -1.75
PGS1	YCL004W	KIN2	P13186	1147 aa	Known RBP	4.11	□□□□□ -1.75
PGS1	YCL004W	RPC53	P25441	422 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	MSH1	P25846	959 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	PXA2	P34230	853 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	VHR1	P40522	640 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	RMD8	P43620	662 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	YHM2	Q04013	314 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	SIZ1	Q04195	904 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	OMS1	Q06668	471 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	PGC1	Q08959	321 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
PGS1	YCL004W	RPL11B	Q3E757	174 aa	Predicted RBP	4.11	□□□□□ -1.75
PGS1	YCL004W	SPT7	P35177	1332 aa		4.11	□□□□□ -1.75
PGS1	YCL004W	SNF1	P06782	633 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	ILS1	P09436	1072 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	NCP1	P16603	691 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	DAL7	P21826	554 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	YCL049C	P25577	312 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	CDC60	P26637	1090 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	DPH2	P32461	534 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	TSL1	P38427	1098 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	CHS7	P38843	316 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	CCT3	P39077	534 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	CCM1	P48237	864 aa	Predicted RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	UBC9	P50623	157 aa	Predicted RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	RRT6	P53117	311 aa	Predicted RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	BTN2	P53286	410 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	MRPL19	P53875	158 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	PTA1	Q01329	785 aa	Predicted RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	HRQ1	Q05549	1077 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	RRG1	Q12167	365 aa	Predicted RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	KCS1	Q12494	1050 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	PMA1	P05030	918 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	FUR1	P18562	216 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	HCA4	P20448	770 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	PGS1	P25578	521 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	FUN30	P31380	1131 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	NGG1	P32494	702 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	YKL100C	P34248	587 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	APM3	P38153	483 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	YEL068C	P39977	110 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	KAP123	P40069	1113 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	LSM5	P40089	93 aa	Known RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	YIL092W	P40497	633 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	AXL1	P40851	1208 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	YKE2	P52553	114 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	ZIP2	P53061	704 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	SYF1	Q04048	859 aa	Predicted RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	YDR514C	Q04408	483 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	VID22	Q05934	901 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	YLR224W	Q05947	369 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	UTP21	Q06078	939 aa	Predicted RBP	4.1	□□□□□ -1.75
PGS1	YCL004W	NUR1	Q12066	484 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	TAH18	Q12181	623 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	ENT1	Q12518	454 aa		4.1	□□□□□ -1.75
PGS1	YCL004W	CDC16	P09798	840 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	GUK1	P15454	187 aa	Known RBP	4.09	□□□□□ -1.75
PGS1	YCL004W	UBC1	P21734	215 aa	Known RBP	4.09	□□□□□ -1.75
PGS1	YCL004W	CDC48	P25694	835 aa	Known RBP	4.09	□□□□□ -1.75
PGS1	YCL004W	SLC1	P33333	303 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	SLA2	P33338	968 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	MXR1	P40029	184 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	SMK1	P41808	388 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	SET2	P46995	733 aa	Known RBP	4.09	□□□□□ -1.75
PGS1	YCL004W	BNA2	P47125	453 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	RNR4	P49723	345 aa	Known RBP	4.09	□□□□□ -1.75
PGS1	YCL004W	CPR6	P53691	371 aa	Known RBP	4.09	□□□□□ -1.75
PGS1	YCL004W	YNL058C	P53947	316 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	SSL2	Q00578	843 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PGS1	YCL004W	DCS2	Q12123	353 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	SVS1	Q12254	260 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	HSP42	Q12329	375 aa		4.09	□□□□□ -1.75
PGS1	YCL004W	RED1	P14291	827 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	PHO3	P24031	467 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	CYS3	P31373	394 aa	Known RBP	4.08	□□□□□ -1.76
PGS1	YCL004W	DCG1	P32460	244 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	CBF2	P32504	956 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	HSL7	P38274	827 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	SRP72	P38688	640 aa	Known RBP	4.08	□□□□□ -1.76
PGS1	YCL004W	RRF1	P38771	230 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	EAF5	P39995	279 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	NPP2	P39997	493 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	JEM1	P40358	645 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	IMA5	P40884	581 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	MAD3	P47074	515 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	PHO23	P50947	330 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	YAP6	Q03935	383 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	NOP12	Q08208	459 aa	Known RBP	4.08	□□□□□ -1.76
PGS1	YCL004W	HMI1	Q12039	706 aa		4.08	□□□□□ -1.76
PGS1	YCL004W	ADH4	P10127	382 aa		4.07	□□□□□ -1.76
PGS1	YCL004W	PDX1	P16451	410 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms