RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeastyeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCH2YBR186W ETR1P38071 380 aa12.16□□□□□ -0.46
PCH2YBR186W TSC10P38342 320 aa12.16□□□□□ -0.46
PCH2YBR186W DIM1P41819 318 aaKnown RBP12.16□□□□□ -0.46
PCH2YBR186W SET2P46995 733 aaKnown RBP12.16□□□□□ -0.46
PCH2YBR186W TAM41P53230 385 aa12.16□□□□□ -0.46
PCH2YBR186W FAP7Q12055 197 aaPredicted RBP12.16□□□□□ -0.46
PCH2YBR186W GSC2P40989 1895 aa12.16□□□□□ -0.46
PCH2YBR186W RNR1P21524 888 aaKnown RBP12.16□□□□□ -0.46
PCH2YBR186W AFG2P32794 780 aa12.16□□□□□ -0.46
PCH2YBR186W GYP6P32806 458 aa12.16□□□□□ -0.46
PCH2YBR186W RLP7P40693 322 aaKnown RBP12.16□□□□□ -0.46
PCH2YBR186W YJL171CP46992 396 aa12.16□□□□□ -0.46
PCH2YBR186W SHE10P53075 577 aa12.16□□□□□ -0.46
PCH2YBR186W YDR476CQ03362 224 aa12.16□□□□□ -0.46
PCH2YBR186W DUS4Q06063 367 aa12.16□□□□□ -0.46
PCH2YBR186W ORM2Q06144 216 aa12.16□□□□□ -0.46
PCH2YBR186W BCP1Q06338 283 aa12.16□□□□□ -0.46
PCH2YBR186W DIA2Q08496 732 aaPredicted RBP12.16□□□□□ -0.46
PCH2YBR186W GPM3Q12326 303 aa12.16□□□□□ -0.46
PCH2YBR186W NOT5Q12514 560 aaPredicted RBP12.16□□□□□ -0.46
PCH2YBR186W PHR1P05066 565 aaKnown RBP RIP-Chip data12.15□□□□□ -0.46not detected
PCH2YBR186W IRE1P32361 1115 aa12.15□□□□□ -0.46
PCH2YBR186W APM2P38700 605 aa12.15□□□□□ -0.46
PCH2YBR186W DYS1P38791 387 aa12.15□□□□□ -0.46
PCH2YBR186W NUP60P39705 539 aa12.15□□□□□ -0.46
PCH2YBR186W FRT2P39734 528 aa12.15□□□□□ -0.46
PCH2YBR186W TMN3P40071 706 aa12.15□□□□□ -0.46
PCH2YBR186W YJL107CP42947 387 aa12.15□□□□□ -0.46
PCH2YBR186W TBF1Q02457 562 aa12.15□□□□□ -0.46
PCH2YBR186W ADE13Q05911 482 aaKnown RBP12.15□□□□□ -0.46
PCH2YBR186W YET3Q07451 203 aa12.15□□□□□ -0.46
PCH2YBR186W ADY3Q07732 790 aa12.15□□□□□ -0.46
PCH2YBR186W SBP1P10080 294 aaKnown RBP12.14□□□□□ -0.47
PCH2YBR186W SSD1P24276 1250 aaKnown RBP RIP-Chip data12.14□□□□□ -0.47not detected
PCH2YBR186W KAR9P32526 644 aa12.14□□□□□ -0.47
PCH2YBR186W ATG19P35193 415 aa12.14□□□□□ -0.47
PCH2YBR186W TGL4P36165 910 aa12.14□□□□□ -0.47
PCH2YBR186W YCK3P39962 524 aa12.14□□□□□ -0.47
PCH2YBR186W MPH1P40562 993 aa12.14□□□□□ -0.47
PCH2YBR186W LIF1P53150 421 aa12.14□□□□□ -0.47
PCH2YBR186W BUD22Q04347 519 aaKnown RBP12.14□□□□□ -0.47
PCH2YBR186W NSE1Q07913 336 aa12.14□□□□□ -0.47
PCH2YBR186W YPR202WQ08993 238 aa12.14□□□□□ -0.47
PCH2YBR186W GET4Q12125 312 aa12.14□□□□□ -0.47
PCH2YBR186W BI2P03873 423 aa12.13□□□□□ -0.47
PCH2YBR186W BI4P03879 638 aa12.13□□□□□ -0.47
PCH2YBR186W URA7P28274 579 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W RAD14P28519 371 aa12.13□□□□□ -0.47
PCH2YBR186W NPL6P32832 435 aa12.13□□□□□ -0.47
PCH2YBR186W STL1P39932 569 aa12.13□□□□□ -0.47
PCH2YBR186W VHR2P40041 505 aa12.13□□□□□ -0.47
PCH2YBR186W HLJ1P48353 224 aa12.13□□□□□ -0.47
PCH2YBR186W HSH155P49955 971 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W MRM2P53123 320 aa12.13□□□□□ -0.47
PCH2YBR186W SOL4P53315 255 aa12.13□□□□□ -0.47
PCH2YBR186W ASI1P54074 624 aa12.13□□□□□ -0.47
PCH2YBR186W IWR1Q07532 353 aaPredicted RBP12.13□□□□□ -0.47
PCH2YBR186W MET7Q08645 548 aa12.13□□□□□ -0.47
PCH2YBR186W MDM20Q12387 796 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W BI3Q9ZZW7 517 aa12.13□□□□□ -0.47
PCH2YBR186W PMA1P05030 918 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W VMA1P17255 1071 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W CDC48P25694 835 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W SIP2P34164 415 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W MAM33P40513 266 aa12.13□□□□□ -0.47
PCH2YBR186W SNX3Q08826 162 aaKnown RBP12.13□□□□□ -0.47
PCH2YBR186W YVC1Q12324 675 aa12.13□□□□□ -0.47
PCH2YBR186W YSC84P32793 468 aa12.12□□□□□ -0.47
PCH2YBR186W AMN1P38285 549 aaPredicted RBP12.12□□□□□ -0.47
PCH2YBR186W FTR1P40088 404 aa12.12□□□□□ -0.47
PCH2YBR186W ARG2P40360 574 aa12.12□□□□□ -0.47
PCH2YBR186W VMA10P48836 114 aaKnown RBP12.12□□□□□ -0.47
PCH2YBR186W YGR125WP53273 1036 aa12.12□□□□□ -0.47
PCH2YBR186W ULP1Q02724 621 aa12.12□□□□□ -0.47
PCH2YBR186W CRD1Q07560 283 aa12.12□□□□□ -0.47
PCH2YBR186W IES3Q12345 250 aa12.12□□□□□ -0.47
PCH2YBR186W TUB2P02557 457 aaKnown RBP12.11□□□□□ -0.47
PCH2YBR186W MST1P07236 462 aa12.11□□□□□ -0.47
PCH2YBR186W PDC5P16467 563 aaKnown RBP12.11□□□□□ -0.47
PCH2YBR186W TMA108P40462 946 aa12.11□□□□□ -0.47
PCH2YBR186W YJL045WP47052 634 aa12.11□□□□□ -0.47
PCH2YBR186W NUT1P53114 1132 aa12.11□□□□□ -0.47
PCH2YBR186W IOC2Q12072 812 aa12.11□□□□□ -0.47
PCH2YBR186W AI5_BETAQ9ZZX0 354 aa12.11□□□□□ -0.47
PCH2YBR186W SEC63P14906 663 aa12.1□□□□□ -0.47
PCH2YBR186W MSD1P15179 658 aaKnown RBP12.1□□□□□ -0.47
PCH2YBR186W CDC42P19073 191 aa12.1□□□□□ -0.47
PCH2YBR186W MEF1P25039 761 aa12.1□□□□□ -0.47
PCH2YBR186W ICL1P28240 557 aaPredicted RBP12.1□□□□□ -0.47
PCH2YBR186W SPT16P32558 1035 aaKnown RBP12.1□□□□□ -0.47
PCH2YBR186W KES1P35844 434 aaKnown RBP12.1□□□□□ -0.47
PCH2YBR186W DIA4P38705 446 aaPredicted RBP12.1□□□□□ -0.47
PCH2YBR186W NPP2P39997 493 aa12.1□□□□□ -0.47
PCH2YBR186W KHA1P40309 873 aa12.1□□□□□ -0.47
PCH2YBR186W FAR3P46671 204 aa12.1□□□□□ -0.47
PCH2YBR186W SFB2P53953 876 aa12.1□□□□□ -0.47
PCH2YBR186W YLR326WQ06170 240 aaKnown RBP12.1□□□□□ -0.47
PCH2YBR186W YOR059CQ08448 450 aaKnown RBP12.1□□□□□ -0.47
PCH2YBR186W HAA1Q12753 694 aaKnown RBP12.1□□□□□ -0.47
PCH2YBR186W PRT1P06103 763 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms