RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	UTP4	Q06679	776 aa	Known RBP	7.52	□□□□□ -1.21
UBP13	YBL067C	YCG1	Q06680	1035 aa		7.52	□□□□□ -1.21
UBP13	YBL067C	RSC6	P25632	483 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	URA7	P28274	579 aa	Known RBP	7.51	□□□□□ -1.21
UBP13	YBL067C	FBP26	P32604	452 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	EXO5	P38289	585 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	HXT16	P47185	567 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	TIM50	Q02776	476 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	SRC1	Q03707	834 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	ERB1	Q04660	807 aa	Known RBP	7.51	□□□□□ -1.21
UBP13	YBL067C	NOP6	Q07623	225 aa	Known RBP	7.51	□□□□□ -1.21
UBP13	YBL067C	BUD20	Q08004	166 aa	Predicted RBP	7.51	□□□□□ -1.21
UBP13	YBL067C	RRT8	Q08219	342 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	WTM2	Q12206	467 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	PCD1	Q12524	340 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	YLR358C	O13565	187 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	MOD5	P07884	428 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	DBP5	P20449	482 aa	Known RBP	7.51	□□□□□ -1.21
UBP13	YBL067C	SIP4	P46954	829 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	NMA111	P53920	997 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	YHM2	Q04013	314 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	COG8	Q04632	607 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	GRX6	Q12438	231 aa		7.51	□□□□□ -1.21
UBP13	YBL067C	RPS31	P05759	152 aa	Known RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	NUC1	P08466	329 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	SUI3	P09064	285 aa	Known RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	SWI6	P09959	803 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	HCA4	P20448	770 aa	Known RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	GCD11	P32481	527 aa	Known RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	AFG2	P32794	780 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	TDA3	P38758	523 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	PEX18	P38855	283 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	CCT7	P42943	550 aa	Known RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	YFL052W	P43551	465 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	DON1	Q05610	365 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	ECM22	Q05958	814 aa	Predicted RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	TPK1	P06244	397 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	CDC26	P14724	124 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	PHO3	P24031	467 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	MGM1	P32266	881 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	SMY1	P32364	656 aa	Known RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	DED81	P38707	554 aa	Known RBP	7.5	□□□□□ -1.21
UBP13	YBL067C	VNX1	P42839	908 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	MRX6	P48564	524 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	SHE4	P51534	789 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	YGR130C	P53278	816 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	CIK1	Q01649	594 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	MMR1	Q06324	491 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	PMT7	Q06644	662 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	MET7	Q08645	548 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	MDY2	Q12285	212 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	AVL9	Q12500	764 aa		7.5	□□□□□ -1.21
UBP13	YBL067C	RPN2	P32565	945 aa	Known RBP	7.49	□□□□□ -1.21
UBP13	YBL067C	SWH1	P35845	1188 aa		7.49	□□□□□ -1.21
UBP13	YBL067C	ETP1	P38748	585 aa	Known RBP	7.49	□□□□□ -1.21
UBP13	YBL067C	MKT1	P40850	830 aa	Known RBP	7.49	□□□□□ -1.21
UBP13	YBL067C	EPL1	P43572	832 aa		7.49	□□□□□ -1.21
UBP13	YBL067C	GYL1	Q04322	720 aa		7.49	□□□□□ -1.21
UBP13	YBL067C	MCH5	Q08777	521 aa		7.49	□□□□□ -1.21
UBP13	YBL067C	CWC2	Q12046	339 aa	Predicted RBP	7.49	□□□□□ -1.21
UBP13	YBL067C	TY3A-G	Q12173	290 aa		7.49	□□□□□ -1.21
UBP13	YBL067C	TY3A-I	Q99219	290 aa		7.49	□□□□□ -1.21
UBP13	YBL067C	CWH43	P25618	953 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	AAR2	P32357	355 aa	Predicted RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	THI6	P41835	540 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	DUO1	P53168	247 aa	Known RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	YBP2	P53169	641 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	HOP2	P53187	214 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	UTP22	P53254	1237 aa	Predicted RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	KCS1	Q12494	1050 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	CAF20	P12962	161 aa	Known RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	DAT1	P13483	248 aa	Known RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	SPS22	P25380	463 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	DMC1	P25453	334 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	ASF2	P32448	525 aa	Predicted RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	NGG1	P32494	702 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	STB6	P36085	766 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	GIP1	P38229	639 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	SWD1	P39706	426 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	SCS2	P40075	244 aa	Known RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	DAK1	P54838	584 aa	Known RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	NGL3	Q03210	505 aa		7.48	□□□□□ -1.21
UBP13	YBL067C	VBA4	Q04602	768 aa	Known RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	CHS5	Q12114	671 aa	Known RBP	7.48	□□□□□ -1.21
UBP13	YBL067C	NOT3	P06102	836 aa	Known RBP	7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-LR4	P0C2I8	440 aa	Known RBP	7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-DR6	P0CX70	440 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-ER1	P0CX71	440 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-LR2	P0CX72	440 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-PL	P0CX73	440 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-JR1	P0CX74	440 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-LR3	P0CX75	440 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	TY1A-ML2	P0CX76	440 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	DAP2	P18962	818 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	DBP2	P24783	546 aa	Known RBP	7.47	□□□□□ -1.21
UBP13	YBL067C	HXT4	P32467	576 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	KRE6	P32486	720 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	HEL1	P36113	551 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	AIM46	P38885	310 aa		7.47	□□□□□ -1.21
UBP13	YBL067C	STT3	P39007	718 aa	Known RBP	7.47	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms